|
Name : wcbD (BCAL3242) Accession : YP_002232351.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Virulence Product : putative capsule polysaccharide export protein ABC transporter membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3524 EC number : - Position : 3548951 - 3550057 bp Length : 1107 bp Strand : - Note : - DNA sequence : ATGAATTTTTTGCGGCGTATTAATCGGTTGTTTCTCTTTACGGTCGTGATCCCTACTGGAATTTCATTGGTATATTTCGG TCTGATTGCGAGTGACGAATACACGTCCGTAAGCAGTTTTCTCATTCGCAGCCCGGCAACCTCTAATTCACCGACGTTGG GCGGGTTGCTGAAAGGTGTCGGGGGCTTCTCCCGATCGGCGGATGATTCGTATACCGTGCAGAATTACATCCTGTCTCGC GACGCGATGATGCTGTTGAACAAGGAGCAGAACATCAAGTCGGCGTTCCAGCACGGCCCGATCGATCCTTTCAATCGCTT TGCCGGCTTCAGCTGGAGCGATAGCCTCGAAGAGTTTTATCGCTACTACACGGAGAAAATTGTTGACGTACAGGTTGACG CAACCGCTTCAATCGTTACGCTCAACACTCACGCCTTCGATGCGAAACTCGCGTGGAACATAAACAAGCGCCTGCTGGAT TTGAGCGAGCAAGTCGTCAATCAAATGAATGAGCGCGCCCGCCTCGACCTGATCAGCTCGGCTCAACGAGATGTCGACAT TGCCAAAGAAAATGATCGTGTCGCAGCGCTTGCACTGGCGAAATATCGAAATACGGCTGGAGTGATCGATCCGGAACGTC AGTCTTCGATTCCGTTGCAGCAAGTCGGCAAGTTGCAAGATCAATTGATCACGACGCGTGTACAAATTGCCGAAATGGAG CGGTTGTCGCCTGCAAACCCTGGGCTTCCCAATTTGCGGGAACGAGCGATTCTGCTGCAAAAGGCCATCGATCAGGTTAG TCAGCATGTCGCCAGTGAGTCTGGAAATTCCCTCGCGAGCAAGGCTGCGGAATTTCAACGACTGACATTGGAAAAAGAGT TTGCTGATAAAATCCTCGCCAGCGCCATCAGTTCGTTGGAGCAGGCCAGAACTGAAGCCGAGAGAAAGCAACTCTATCTG GAGCGAATTGCGGCCCCCAGTCTGCCGGATTATGCGATGTCCCCGCGCCGTGGCCGCAATATTCTTGCGACCTTCTTGCT TGGGCTAGTGTTTTGGGGCGTGTTGACCATCGTGATTGGTGGGGTAAAAGAGCATTATGACCGCTAA Protein sequence : MNFLRRINRLFLFTVVIPTGISLVYFGLIASDEYTSVSSFLIRSPATSNSPTLGGLLKGVGGFSRSADDSYTVQNYILSR DAMMLLNKEQNIKSAFQHGPIDPFNRFAGFSWSDSLEEFYRYYTEKIVDVQVDATASIVTLNTHAFDAKLAWNINKRLLD LSEQVVNQMNERARLDLISSAQRDVDIAKENDRVAALALAKYRNTAGVIDPERQSSIPLQQVGKLQDQLITTRVQIAEME RLSPANPGLPNLRERAILLQKAIDQVSQHVASESGNSLASKAAEFQRLTLEKEFADKILASAISSLEQARTEAERKQLYL ERIAAPSLPDYAMSPRRGRNILATFLLGLVFWGVLTIVIGGVKEHYDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrB | NP_273136.1 | capsule polysaccharide export inner-membrane protein | Not tested | IHT-A | Protein | 1e-63 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcbD | YP_002232351.1 | putative capsule polysaccharide export protein ABC transporter membrane protein | VFG2565 | Protein | 4e-75 | 45 |
| wcbD | YP_002232351.1 | putative capsule polysaccharide export protein ABC transporter membrane protein | VFG0686 | Protein | 5e-65 | 44 |
| wcbD | YP_002232351.1 | putative capsule polysaccharide export protein ABC transporter membrane protein | VFG0698 | Protein | 5e-65 | 44 |
| wcbD | YP_002232351.1 | putative capsule polysaccharide export protein ABC transporter membrane protein | VFG0256 | Protein | 6e-64 | 42 |
