|
Name : xerD (BCAL2773) Accession : YP_002231875.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3043949 - 3044899 bp Length : 951 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGAGCGAACCTGTGACGACCCCCGAAGCCGACGACGATGCCGTCGCGGCATCGCCCGCGCTGCTCGCGAGCCGCGCGTC GATCGACGTGTTCTGCGATGCGTTGTGGCTCGAACACGGCCTCGCGCGCAACACGCTCGATGCGTACCGGCGCGATCTGG TGCTGTTTTCCCAATGGCTGGCCGCGACGCACGCCGCGCCGCTCGACGGCGCCGACGAGGCGATGGTGACCGGCTACATC GCCGCGCGCAGCGACGGCAAGGCGACGTCGTCGAACCGGCGACTGTCCGTGTTCCGTCGCTATTACGGCTGGGCCGTGCG CGAGCATCGCGCGAGCGCTGACCCGACGCTGCGGATCACGTCCGCGAAACAGGCGGCCCGGTTCCCGTCGACATTGTCGG AGGCGCAGGTCGAGGCGCTGCTGGGCGCGCCGGACATCGGCACGCCGCTCGGCCTGCGCGATCGCACGATGCTCGAGCTG ATGTACGCGAGCGGGCTGCGCGTGAGCGAGCTCGTGACGCTGAAGACCGTCGAAGTCGGCCTCAACGAAGGCGTCGTGCG CGTGATGGGCAAGGGTTCGAAGGAGCGGCTCGTGCCGTTCGGCGAAGTCGCGCACGGCTGGATCGAACGCTACCTGCGCG ACGCGCGGCCCGCGCTGCTCGGCGCACGCGCGGCCGATGCGCTGTTCGTGACCGCGCGCGGCGACGGGATGACGCGCCAG CAGTTCTGGAACATCATCAAGCGTCACGCGCAGCAGGCCGACGTGCGCGCGCACCTGTCGCCGCACACGCTGCGGCACGC GTTCGCGACGCACCTGCTGAACCACGGCGCCGACCTGCGCGTCGTGCAGTTGCTGCTTGGCCACAGCGACATCTCGACCA CGCAGATCTATACGCACGTCGCGCGCGAGCGGCTCAAGACGCTGCACGCGCAGCATCACCCGCGCGGCTGA Protein sequence : MSEPVTTPEADDDAVAASPALLASRASIDVFCDALWLEHGLARNTLDAYRRDLVLFSQWLAATHAAPLDGADEAMVTGYI AARSDGKATSSNRRLSVFRRYYGWAVREHRASADPTLRITSAKQAARFPSTLSEAQVEALLGAPDIGTPLGLRDRTMLEL MYASGLRVSELVTLKTVEVGLNEGVVRVMGKGSKERLVPFGEVAHGWIERYLRDARPALLGARAADALFVTARGDGMTRQ QFWNIIKRHAQQADVRAHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKTLHAQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-59 | 55 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-59 | 55 |
