|
Name : BCAL2278 (BCAL2278) Accession : YP_002231404.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Unknown Product : IS1356 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 2525354 - 2526613 bp Length : 1260 bp Strand : + Note : Identical to Burkholderia cepacia IS1356 transposase SWALL:Q45111 (EMBL:U44828) (419 aa) fasta scores: E(): 1.2e-169, 100% id in 419 aa DNA sequence : ATGCCACGCAAACGCAAGGAAGAAGTGCCGGTAGAACCGGGCAAGGGCTTGAACCTGGACCCGGAACTCATCAAGCAACT GGTGCCCGGAACGCTGGATCGGGCTTCGATCAACGAGCAATTCGCGGCCCTGAAGAAGGCGATATTCGAGCGCGCGCTGG GCGGCGAACTGACCCACCACCTGGGCTACGAGAAGGGCGATGCCAAGCCGGCGGGCCGCACGAACCATCGCAACGGCACC AGCCGTAAGCGCATCGCGACCGACGATGATCTGCTCGACATCGAGATTCCGCGCGACCGCGAAGGCACGTTCGATCCGGT GCTGATTGCCAAGGGCGAGCGACGCTTCACGGGCTTCGACGACAAGATCATTGCGATGTACGCACGCGGCATGAGCGTGC GGGAGATTCAGGGTTTCTTGCTGGAGATGTACGGCATCGAGGTGTCGCCGGAATTCATCAGCACGGTGACCGACGCCGTG ATCGACGAAGTGCGCGAGTGGCAGCAGCGGCCGCTTGAGCCGATGTACCCGGTCGTGTTCTTCGACGCCTTGCGAGTCAA GATCCGCGACGAAGGCGTCGTGCGCAACAAGGCGATCTACCTGGCGCTGGGCGTGCGCCGCGACGGCACACGCGACGTGC TGGGCCTCTGGATCGAGCAGACCGAGGGCGCCAAGTTCTGGCTGCGGGTGGTCAACGAGCTGAAGCTGCGCGGCGTGCAG GACATTCTGATCGCCGTGGTCGACGGCCTGAAGGGCTTCCCGGAAGCGATCAACACGGTGTTCCCGGAAACGACGGTCCA GACCTGCATCGTGCATCTGATCCGGAACTCGCTGGACTTCGCCAGTTGGAAGGACCGGAAATCGGTCGCGGCGGCGCTCA AGGAAGTCTATCGGGCACCGTCGGCCGAAGCGGCCGCCGTGGCGCTGGACGCGTTCGATACGAGCCCGTGGGGTACGAAA TACCCTCCGATTGCCGCGCTCTGGCGCCGGGCCTGGGATCAGGTGATTCCGTTCTACGCCTTCGCGCCCGACATCCGGAA AATTGTATATACGACCAACGCGATCGAGTCGCTGCATATGCAGCTTCGAAAGATCATCAAGGCGCGCGGCCACTTCCCGT CGGACGAGGCCGCGCTCAAACTGATCTGGCTGGCGCTGCGCAACGTCGTGGCCAAGTGGACCGGCTCTCGGCACGATTGG AAGAGCGCGATGACCCAGTTCGCGCTGCTTTACCCCGAACGATTCAACATTGGAATCTGA Protein sequence : MPRKRKEEVPVEPGKGLNLDPELIKQLVPGTLDRASINEQFAALKKAIFERALGGELTHHLGYEKGDAKPAGRTNHRNGT SRKRIATDDDLLDIEIPRDREGTFDPVLIAKGERRFTGFDDKIIAMYARGMSVREIQGFLLEMYGIEVSPEFISTVTDAV IDEVREWQQRPLEPMYPVVFFDALRVKIRDEGVVRNKAIYLALGVRRDGTRDVLGLWIEQTEGAKFWLRVVNELKLRGVQ DILIAVVDGLKGFPEAINTVFPETTVQTCIVHLIRNSLDFASWKDRKSVAAALKEVYRAPSAEAAAVALDAFDTSPWGTK YPPIAALWRRAWDQVIPFYAFAPDIRKIVYTTNAIESLHMQLRKIIKARGHFPSDEAALKLIWLALRNVVAKWTGSRHDW KSAMTQFALLYPERFNIGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 3e-94 | 46 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 3e-86 | 45 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 5e-87 | 44 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 9e-83 | 44 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 7e-80 | 44 |
