Gene Information

Name : BCAL0952 (BCAL0952)
Accession : YP_002230106.1
Strain :
Genome accession: NC_011000
Putative virulence/resistance : Virulence
Product : two-component regulatory system, response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1040227 - 1040955 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTCTCATCGCCGAAGACGACAGCATACTCGCGGACGGCCTCACCCGGTCACTCCGCCAATCGGGCTATGCCGT
CGATCACGTGAAGAGCGGCATCGACGCCGACACCGCGCTGTCGATGCAGACTTTCGACCTGCTGATCCTCGATCTCGGGC
TGCCGAAAATGTCCGGGCTCGACGTGCTCAAGCGCCTGCGCGCGCGCAATTCCAATCTTCCCGTGCTGATCCTGACCGCC
GCCGACAGCGTCGACGAACGCGTGAAGGGACTCGACCTCGGCGCCGACGACTACATGGCCAAGCCGTTCGCGCTCAACGA
GCTCGAGGCGCGCGTGCGCGCGCTGACCCGGCGCGGCGCCGGCGGCGGCCCGACCGTCGTGCGCCACGGCTCGCTCGCGT
TCGACCAAGTCGGCCGCATCGCGTATGCGAACGATCACGTGCTCGATCTCTCCGCGCGCGAACTGGGCCTGCTCGAGGTG
CTGCTGCAGCGGATCGGCCGGCTCGTGTCGAAGGAACAGCTCGTCGATCACCTGTGCGAATGGGGCGAGGAAGTCAGCAA
CAACGCGATCGAAGTCTACGTGCACCGGCTGCGCAAGAAGATCGAACCGAGCGGCGTGCGGATCTCGACCGTGCGCGGCC
TCGGCTATTGCCTCGAGAAGGTCGCGCCCGCGACGCCGGCCGACACGGCGGCGCCCCAGCCCGCGGCGGCCGGCACGCCG
CTGCGCTGA

Protein sequence : 
MRILIAEDDSILADGLTRSLRQSGYAVDHVKSGIDADTALSMQTFDLLILDLGLPKMSGLDVLKRLRARNSNLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAGGGPTVVRHGSLAFDQVGRIAYANDHVLDLSARELGLLEV
LLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEPSGVRISTVRGLGYCLEKVAPATPADTAAPQPAAAGTP
LR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein BAC0487 Protein 8e-37 44
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein BAC0083 Protein 4e-36 44
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein BAC0638 Protein 8e-30 44
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein BAC0308 Protein 3e-31 41
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein NC_002516.2.879194.p Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein VFG0473 Protein 2e-41 44
BCAL0952 YP_002230106.1 two-component regulatory system, response regulator protein VFG1390 Protein 2e-35 42