Gene Information

Name : clpP (LCABL_09840)
Accession : YP_001986928.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Unknown
Product : Clp protease domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : 3.4.21.92
Position : 946931 - 947638 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACAGTGGTACCGATTAAAGGTGACATCGTTACTAATGATTACGGATGGCTTTACGATCTATTTGGCGATGACTA
TGCTTCACCTAAAAGCGTCTCTGATCTAATTAACAAGGCTAATGGTGACGACTTATCCGTTGAGATCAATTCAGGTGGAG
GAATTCTCGATGCCGGCTCTGAAATTTACACCATGCTTCGTGCTTATAAAGGACCGGTCAATGTGAACGTTGTGGGTGTG
GCATATTCCGCTGCATCTTTGATCGCGATGGCGGGTGATGTCGTAGCCGTGTCACCTGCAGGGATGATGATGATCCACAA
TGTCTCCAGTGGACAGATGGGTGACTATCATGACATGCAGAATGCTGCGGACTCGTTAAAGAAGTCAAACATAGCAATAG
CTAATGCCTATATGGCCAAGACGGGTCTATCTCAAACAGAAATCCTTGACTTGATGGATTCAACTTACTGGCTGGATCCG
CAGACAGCCATTGAAAAAGGGTTTGCTGACAAGATGATGTTTGACAATGCGGAGAAGCCAGGGAAAATGATCATGACTGC
TAGCCTGAATAAGATTCCAAGTCTTGCCACGCTGAACCAAATGAAACACTTCCGAAACACAACAGCACTAAAAAAAGCGC
CGTCTGATGATGATCAGATGGCGCTTTTGAATGCAGAATACAATCTCTTAAATTTGAAAGGGGAATAA

Protein sequence : 
MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGILDAGSEIYTMLRAYKGPVNVNVVGV
AYSAASLIAMAGDVVAVSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQTEILDLMDSTYWLDP
QTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKKAPSDDDQMALLNAEYNLLNLKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-27 43
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 43
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 43
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 2e-27 43
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 2e-27 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 2e-27 42