Gene Information

Name : LCABL_04660 (LCABL_04660)
Accession : YP_001986450.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 463343 - 464032 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGCTATCGAATTACAACACATCATTAAAAATTTTAAAACGCCAACCAGCGATGTCGAAGTCCTCAAAGATGTTAG
CTTCAGTGCCGAACCCGGCAGTCTTTCGCTGGTGCTTGGGCCGTCTGGTTCAGGAAAAAGTACGTTTTTGACCATTGCAG
GTGGCATTCAAACCCCAACATCAGGGGTCGTGACAACCGCTGGACAGGAGCTTGATAAGTTATCCGGCAAGGCGCGTGAT
GCATTGCGGTTGGATAAGATCGGATTTGTTCTTCAGTCATACAACCTCGTCCCATATTTGACGGTTGGCGAGCAGTTCAC
TTTAGTCGACAAGATTAAGCCAAAGAACAACCTCAGTCATGAGGAACTTGATCAATTGCTGGATGATCTCGGTATTGGTG
ACCTAGTTAATCAAAATCCGGCTTCCTTATCCGGCGGCCAAACACAACGGGTGGCCATTGCACGAGCCTTGTATCCCGAT
CCAGCCATCGTGTTGGCCGACGAACCAACCGCCGCATTGGATAGTCCGCGTGTGGCAGTTGTCGGACAGCTGCTAGCTGA
TCTGGCACATAAGCGTGATAAGGCAATTGTGGTTGTCACCCATGATGTTCGCTTAGAAAAGTTTGCGGATCGCACGTTTA
CTTTGTTGGATGGTCAGTTAAGCGAAGGTGACACTTCCAACGCAGCATAG

Protein sequence :
MSAIELQHIIKNFKTPTSDVEVLKDVSFSAEPGSLSLVLGPSGSGKSTFLTIAGGIQTPTSGVVTTAGQELDKLSGKARD
ALRLDKIGFVLQSYNLVPYLTVGEQFTLVDKIKPKNNLSHEELDQLLDDLGIGDLVNQNPASLSGGQTQRVAIARALYPD
PAIVLADEPTAALDSPRVAVVGQLLADLAHKRDKAIVVVTHDVRLEKFADRTFTLLDGQLSEGDTSNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-33 45
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 9e-30 43