Gene Information

Name : serB (LCABL_29090)
Accession : YP_001988817.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 3.1.3.3
Position : 2870204 - 2871073 bp
Length : 870 bp
Strand : -
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
TTGAATTCACTAGGAATCTACGAAAAGGCACTCCCAAAAACTGATTCATGGCAGCAGAGGTTGCAACAGGCTCACGATTT
AGGGTTCAACTTTTTGGAATTGTCGATTGATGAAAGCGATGAACGCTTAGCCCGACTTGATTGGACGAAAGCACAGCGAG
CAGAAGTACGGGATGCAAGTTGGCAAACCGGTGTGAGACTGCACACCTTAATGCTCAGTGGCCATCGTCGCTACCCACTT
GGCTCGGCTGATCCGGCAATTCGAGAAAAAAGCCTTGAAATGCTTTATAAGGCAATCGATTTAGCCGGTGATCTCGGCAT
TCGTAACATTCAGCTTGCTGGCTATGATGTTTATTACGAACCAAAGACGGTGACCTCGCGAGAATACTTCATTGAGAACT
TAAAACGTGGCGTCGCTTATGCTGCGGCTAAGGAAGTCATGCTTGATATTGAAACAATGGATGATCCTTTCCTAAACGCC
TTGACCAAAATTAAGGACATCAAAACGCAAATTCGCAGTCCGTGGTTGCAGGCATACCCAGACGTCGGCAATCTAACTGC
TTGGCCGGAAAACAATGTCGGTCAAGAGTTAGAACGAGGCATTGATAATATTGTTTCGGTTCATTTAAAAGACACCTTGC
CAGTCACCGCCGAAAGTAAAGGTCAGTTCCGAGATGTACCGTTTGGCGATGGCACCGTTGATTTCGAAGGCTGTCTGCGT
ACGTTGAAACGCCTGAATTATGGCGGGGCCTTCACCATTGAGATGTGGACGGAAAAGGCCGATGATCCGCTGGCAGAAGT
GAAAAAAGCGAAACAGTTCTTTGATGATCTTTTTGAACGGGTTGGATTGGAGCAGGAACCAGTGGTGTAG

Protein sequence :
MNSLGIYEKALPKTDSWQQRLQQAHDLGFNFLELSIDESDERLARLDWTKAQRAEVRDASWQTGVRLHTLMLSGHRRYPL
GSADPAIREKSLEMLYKAIDLAGDLGIRNIQLAGYDVYYEPKTVTSREYFIENLKRGVAYAAAKEVMLDIETMDDPFLNA
LTKIKDIKTQIRSPWLQAYPDVGNLTAWPENNVGQELERGIDNIVSVHLKDTLPVTAESKGQFRDVPFGDGTVDFEGCLR
TLKRLNYGGAFTIEMWTEKADDPLAEVKKAKQFFDDLFERVGLEQEPVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 4e-65 52