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Name : lysS (LCABL_26990) Accession : YP_001988608.1 Strain : Lactobacillus casei BL23 Genome accession: NC_010999 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2645045 - 2646541 bp Length : 1497 bp Strand : - Note : - DNA sequence : TTGGCTAAGGATAACGGACAGCAACCAGAAATGAATGACCAAATGATTGCGCGGCGAGAAAAGATGGAAGCCTTGCGTGA AGCGGGCATCGATCCATTCGGGCACCGATTTGACCGGACCCATACCGCAGCGAAAGTACGCGAAGAATTCGGTGAAGATG ATAAAGAGACACTCTTGGATGAAAAACCAGAAGTGACAATTGCCGGCCGGATGATGTCTAAACGTGGCAAAGGCAAGGTT GGATTTGCGGATATTCGTGATCGTAGCGGGAAGATGCAGATCTATGTACGTAAAGATGTCGTTGGCGATGACAACTACAT GATCTTCAAAAAGGCCGATCTTGGCGATATTCTTGGTATCAGCGGTGAAGTCATGAAAACTGATTCTGGCGAGCTGACGG TTAAAGCCAACCATGTGACCCATCTTGCTAAGGCACTCCGCCCATTACCTGATAAGTGGCATGGCCTGACCGATGTCGAG CAAAAGTATCGGAAGCGTTACCTTGATCTTATTTCTAATGAGGACAGCTTTGATCGTTTTGTTAAGCGAACCAAGATTGT CAGTGCTGTCCGTGAATACTTGGACAACAATGGTTTCTTGGAGGTCGAGACACCAGTCTTACACAATCAGGCTGGCGGGG CGAATGCTCGTCCATTCGTGACTCATCACAATGCACTTGATATTGATTTATATTTGCGGATTGCTCTTGAACTGCACTTA AAGCGTCTAATTGTTGGCGGCATGGAACGTGTTTATGAAATTGGCCGAGTTTTTCGGAATGAGGGGATTGATACCAAGCA TAATCCCGAGTTCACTGAACTTGAAACTTATGCCGCCTACTGGGATTTGACAGATGTTATGACCGAAACTGAAGGGATTT TCCGGTTTGCTGCGCATAAGGTGCTAGATACCGGGAAGCTCACCTATCAGGGAATGGCGATTGATCTGGACGCACCGTTT GCCCGAATTAATATGTTGGACGCCATTAAAGACAAGACTGGCGTGGACTTCTGGCCTGAAATGAGTGTCGATGATGCGCG TAAACTTGCCGATGAACATGATGTTCACTATGAACCTTATTGGAAGGTGGGCCATATTATCAGTGCCTTCTTCGATCAGT TTGTCGAAGAGACGCTCATTCAGCCGACCTTCATCACGGGCCATCCAATCGAGGTTTCACCACTGGCAAAGAAGAATCCA AAAGACCCGCGGTTTGTTGAACGTTTTGAACTATTTGTTGGTGGCGGTGAATACGCCAATGCCTTTACAGAATTAAACGA TCCAATTGATCAGCGCCAGCGTTTTGAAGCGCAGGCAGCTGAAAAGAGTGCTGGTAATGACGAAGCACAAGGTATCGATG ACGATTACGTTGAAGCTTTGGAATACGGCATGCCGCCAACTGGTGGTCTCGGAATCGGGATTGATCGCTTAGTCATGTTG CTGACTGATGCACCATCCATTCGCGATGTCCTTTTGTTCCCAACATTGCGGCCATAA Protein sequence : MAKDNGQQPEMNDQMIARREKMEALREAGIDPFGHRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKV GFADIRDRSGKMQIYVRKDVVGDDNYMIFKKADLGDILGISGEVMKTDSGELTVKANHVTHLAKALRPLPDKWHGLTDVE QKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELHL KRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKNP KDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVML LTDAPSIRDVLLFPTLRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-113 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_001988608.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-114 | 46 |
