Gene Information

Name : mtsB (LCABL_25930)
Accession : YP_001988517.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2551159 - 2552055 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGACATCAATAATGGAATTCTTTACCGCTTTGGGAAAATATGATTTCCTGCAAAGCGCGTTGATCACCGCCATCATGGT
TGGTATCATGTCAGGCTTGATCGGAAGCTTCATCATTTTACGCGGCATGTCGCTGATGGGGGATGCGATTTCCCATGCGG
TCCTGCCCGGGGTAGCCGTTGCTTATATGCTCGGTATTAACGTCATGATCGGGGCATCGGTTTTCGGAATTATTGCGGCT
TTGCTGATCGGGTTTGTGGCAGCCAATAGTAAAATCAAAACCGACACATCTATCGGGGTCGTGTTCAGTGCGTTCTATGC
CTTGGGTTTTATTCTGATTTCAATGGCTGAAAGTGCGACCAACTTGCACCATATTCTGTTCGGTAACATTTTAGCCGTCA
GCGACAGCGACATTGTCACCACCGCTGTCGTGTTGGGAATTGTGATCCTGTTCGTGGTTCTGTTCTATAAGGAACTGCTG
ATCACCTCGTTTGATAATACGTTTGCGAAAAAGTATGGCTTGAATACCACCATGATTCACTATGCTTTGATGCTGGTGTT
GACGCTTGTCACCGTTTCAGCCTTGCAGACAGTTGGGATCATTCTAGTTGTGGCGATGCTGATTACGCCAGCAGCAACTG
CCTTCTTGTGGACGGATCGGTTAGAAACGATGCTGATCACGTCCGCTAGCGTAGGCGTTTTCTCGGCCATCACCGGACTT
TACTTCAGTTTCACCTTTAACTGGGCATCCGGGCCGGCCATTGTGCTCGTAGCTGCGGTCCTGTTCGCCATTTCCTTCGT
CTTCTCACCGAAGCAGGCGTTCTTCAGTTTCAGTAAAAAAAACCGAGAAAAGAAAACCGCTGCTGCTACTCACACTGCCG
AGGAGGCTGTTCGATGA

Protein sequence : 
MTSIMEFFTALGKYDFLQSALITAIMVGIMSGLIGSFIILRGMSLMGDAISHAVLPGVAVAYMLGINVMIGASVFGIIAA
LLIGFVAANSKIKTDTSIGVVFSAFYALGFILISMAESATNLHHILFGNILAVSDSDIVTTAVVLGIVILFVVLFYKELL
ITSFDNTFAKKYGLNTTMIHYALMLVLTLVTVSALQTVGIILVVAMLITPAATAFLWTDRLETMLITSASVGVFSAITGL
YFSFTFNWASGPAIVLVAAVLFAISFVFSPKQAFFSFSKKNREKKTAAATHTAEEAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-57 59
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-57 59
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-40 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-40 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 8e-40 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-40 43
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_001988517.1 hypothetical protein BAC0352 Protein 4e-40 43
mtsB YP_001988517.1 hypothetical protein BAC0442 Protein 3e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_001988517.1 hypothetical protein VFG0528 Protein 3e-40 43