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Name : pdp (LCABL_23870) Accession : YP_001988312.1 Strain : Lactobacillus casei BL23 Genome accession: NC_010999 Putative virulence/resistance : Unknown Product : Pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2344070 - 2345374 bp Length : 1305 bp Strand : - Note : - DNA sequence : ATGCGCATGGTCGATTTAATCACGAAAAAACGTGATCACAAAGCTTTAACCAATGAAGAGCTCACTTGGATGATTGAACA GTATACGGCAAAAGCAATTCCGGATTATCAGATGAGTGCTTTTCTGATGGCGGTCTATTTTAATGGTATGACGCCAGAGG AACGCAGCCATTTTGCTTTTGCAATGCTGCATTCCGGTGACGTACTTGATTTGAGCGATATTCCGGGTATTAAAGTCGAT AAACACAGTACTGGCGGTGTCGGTGACAAAATTAGTATTCCGTTGGCGCCGCTGGTTGCGTGTCTAGGTGTGCCGGTGCC GATGATTTCCGGGCGCGGTCTTGGTCACACGGGCGGTACATTGGACAAACTTGAGAGCATTCCTGGCTTCAATGTTGCGG AAAGCGAAACCCAATTCAAGCAGCAGGTACAGCAAATCAATGAAGCCATTATCAGTGCGAGCGGCGAGGTTGCGCCAGCA GATCGACGGATTTACGCTTTGCGCGATGTCACAGGTACGGTTGAATCGATTCCGTTGATTGCGGGGTCGATCATGAGTAA AAAGTTAGCCAGTGGTACGAATGCCTTGGTCTTTGATGTAAAAGTCGGCAATGGCGCATTTATGAAGACCACTGAAGATG CGCGGGCGTTGGCCAAAGCCTTGGTGGGTATCAGCAAAACCGCTGGGGTTAAAAGTGTGGCTTTGTTGACAGACATGAGC CAGCCGCTGGGCATTACGATTGGTAATAGTCTGGAAATTGCGGAATCTATTGCCATTCTTAAAAATCGCGGTCCGAAAGA CGTCCATGATCTCACCGTTGCGTTGGCAGCACAGATGCTGGTGCTTGGCGGCAAGGCGGCAAGTCTAGAGATTGCCAGCG GCTTAGCCGAAGATGCGCTGCGTGACGGGCGTGCGTTGAATGCCTTCAAGCAATTGATCACGGCACAAGGCGGGGATACT TCAGTGGTGGACGATCCACGCAAACTGCCACAAGCTAAGTATCGAATTGCTGTGAAAGCTGCCGAATCTGGCATTGTTGA CCAAATTGACACAAATGCTCTCGGTTTGGCAGCGATGCAACTTGGTGGCGGTCGAGCGAAAAAAGATGATATTTTAGACT TGGCAGTAGGGCTTGTTCTGCATAAAAAACTGGGGACACCTGTGACCAAAGGCGATACGTTGGTTACGCTGCATGCCGAC ACCGAGAAAGTTGACGCTATCAGCAACATGGTCAGAAGCGCTTATCATATTGGCGATAAAGCGCCGAAAAAAACGCCGCT GATTCAAGAAGTGATTCGCCCCTAA Protein sequence : MRMVDLITKKRDHKALTNEELTWMIEQYTAKAIPDYQMSAFLMAVYFNGMTPEERSHFAFAMLHSGDVLDLSDIPGIKVD KHSTGGVGDKISIPLAPLVACLGVPVPMISGRGLGHTGGTLDKLESIPGFNVAESETQFKQQVQQINEAIISASGEVAPA DRRIYALRDVTGTVESIPLIAGSIMSKKLASGTNALVFDVKVGNGAFMKTTEDARALAKALVGISKTAGVKSVALLTDMS QPLGITIGNSLEIAESIAILKNRGPKDVHDLTVALAAQMLVLGGKAASLEIASGLAEDALRDGRALNAFKQLITAQGGDT SVVDDPRKLPQAKYRIAVKAAESGIVDQIDTNALGLAAMQLGGGRAKKDDILDLAVGLVLHKKLGTPVTKGDTLVTLHAD TEKVDAISNMVRSAYHIGDKAPKKTPLIQEVIRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-82 | 47 |
