Gene Information

Name : pfoSR (LCABL_23370)
Accession : YP_001988262.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Virulence
Product : PTS system fructose-specific transporter subunit IIBC
Function : -
COG functional category : R : General function prediction only
COG ID : COG3641
EC number : -
Position : 2284033 - 2285091 bp
Length : 1059 bp
Strand : -
Note : -

DNA sequence : 
TTGGAGGACAAGTCAATGAAACAAGATGCTAAAACCATTACTATGAACATTTTGAACGGATTATCCGTGGGAATTATTGT
CGCCTTGGTACCCGGCGCTATTTTGAACGCAATTGTCAAACTGTTGCTGCCAAGCTTTCCGCAATTGGCGGTGGTTACCT
ACATGACAGGGGCGGCAATGACTTTGTTGCCGGCACTGTCGGCTGTCTGTGTCGGCATGCTGGCCAAATTTACGCCGATT
CAAACCAGTTCGTTAGCTTTGGCCGCGATCGTTGGGGCGGGCAACTACCATCTGACTAAAACAGGATTGACGGTTGCTGG
TACTGGCGATGTCATTAACCTTGCGATCACCTTAGCCATTGGTTATTTGTTGATAGTGCTGCTTGGTGACGCCTTGAAAG
CTTATACGATTTTGCTCATTCCATCACTGGTGCTGGTCATTGCTGGCTGGATTGGCATGTTAACGCTTGGGCCGGTTTCA
AGCATCACGAAGTATATTGGTGTCGTTGTCCATGATGTGACGGCCTTGCAGCCAATCGTGATGGGTGTGCTCATGGGGAT
CATTTTCGCCGTGTTGATTGTGAGCCCGATCAGTACGGTCGGTATTGCCACGGCAATCTCGTTGACCGGTATCGGTGCGG
GTTCTGCTAACCTCGGGATTGTGGGGGCAGGTTTTGCCTTGGCGACCTATGGCTGGAAGGCAAACTCTTTTGGCACGTCG
CTGGCTCACTTCCTCGGTTCGCCAAAAATGCAGATGGCTAACATTCTTTCTCGGCCAAAGCTCTTTTTGCCGATGGCGAT
TAATGCTGGCATTCTAGGCGGTATTGGGGCGGCGTTGAACATTCAAGGCACCCCGGCCAGTGCCGGTTTTGGATTTTCTG
GCTTAGTCGGTCCCTTGGCAGCGCTTGATGCTATGGGCAGTGTCACAGTTGGCAATGTCCTTGAATTGACCTTGTTATTC
TTTATCTTGCCGATTGCGTTGGCCTATGCGAGTCATGTCTTGTTCACCAAGACGCTGCATTATCAAGACCCTAAAGACTA
TGCTTTGAATTACAACTGA

Protein sequence : 
MEDKSMKQDAKTITMNILNGLSVGIIVALVPGAILNAIVKLLLPSFPQLAVVTYMTGAAMTLLPALSAVCVGMLAKFTPI
QTSSLALAAIVGAGNYHLTKTGLTVAGTGDVINLAITLAIGYLLIVLLGDALKAYTILLIPSLVLVIAGWIGMLTLGPVS
SITKYIGVVVHDVTALQPIVMGVLMGIIFAVLIVSPISTVGIATAISLTGIGAGSANLGIVGAGFALATYGWKANSFGTS
LAHFLGSPKMQMANILSRPKLFLPMAINAGILGGIGAALNIQGTPASAGFGFSGLVGPLAALDAMGSVTVGNVLELTLLF
FILPIALAYASHVLFTKTLHYQDPKDYALNYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pfoS YP_005681735.1 Regulatory protein Virulence PiCp 5 Protein 7e-52 46
pfoS YP_005683834.1 Regulatory protein Virulence PiCp 5 Protein 7e-52 46
cpfrc_01478 YP_003783878.1 hypothetical protein Virulence PiCp 5 Protein 7e-52 46
pfoS YP_005685920.1 Regulatory protein Virulence PiCp 5 Protein 7e-52 46