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Name : clpE (LCABL_19810) Accession : YP_001987917.1 Strain : Lactobacillus casei BL23 Genome accession: NC_010999 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease ATP-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1918940 - 1921036 bp Length : 2097 bp Strand : + Note : - DNA sequence : ATGAGACCAACTGATGCAACCGATCCATTTGGTTTCGGCAGCTTAGATGATATTTTCCGTGCGATGAATCAGGGAATGGA TCAACCGCAACAACCAAATGCTCAGACCCCGCCAACTCAGGCAGGCCGTGGCGGCAATGGTAATAACGGCCGCAATGGCA ACCGTGGCAAGGGACTGCTGGGACAATTCGGCGTTGATCTGACTGAACAAGCACGGAATGGTCAAATTGATCCGGTCATT GGTCGTGACAAAGAAATTTCACGGGTGATCGAGATCTTAAACCGCCGAACAAAAAATAATCCAGTCCTGATTGGTGAAGC CGGTGTCGGCAAGACTGCTGTTGTTGAGGGCTTGGCATTGAAGATCGCTAATGGCGATGTTCCGTCAAAACTTCAAGATC GGCACGTCATCCGACTCGATGTCGTTTCACTAGTTCAAGGAACTGGCATTCGCGGTCAATTCGAACAACGTATGCAACAA TTGATTGACGAACTTAAAAAGAATAAGAACATTATCTTATTTATTGATGAAATCCATGAAATCGTCGGCGCTGGCAATGC TGAAGGCGGTATGGATGCCGGCAATGTTCTGAAACCAGCATTAGCACGTGGCGAGTTGCAGCTCGTTGGTGCCACTACTA GCAATGAATATCGTCAAATTGAAAAAGACTCAGCCCTTGCTCGTCGTCTGCAACCAGTCCTCGTTGAGGAGCCAACTGTC GAAGAGACGATTAAGATTCTAAAAGGCCTGCAGCCGCGGTATCAAGATTTTCATCATGTTAAATATACAGATGCCGCCAT TGAAGCAGCTGCAACTTTGAGCAATCGTTACATTCAAGATCGTTTCTTGCCTGACAAAGCGATTGACCTTCTGGATGAAT CAGGTTCCCGGAAGAATCTGACCATTGCCACTGTCGATCCAGAAACGATCAAGACCAAGATTGACGACGCCGAGAAGCAA AAGCAAGCTGCTCTGAAGCAGGAGGATTACGAAAAAGCTGCCTTCTATCGTGACCAAGTTACTAAGTTAGAAGATATGGC TAAGAAACAGTCTACTCTGCCTGAAAATGAAATTCCGACTGTCACCGAAAAAGATATGGAACAGATTGTTGAAGAAAAAA CCAACATTCCAGTTGGTGAACTGAAGGCGCAGGAGCAAGCACAGCTGAAGAATCTGGCTGGTGACCTTGAAAAGCATGTC ATTGGTCAGAATGAAGCAGTTGATAAAGTTGCTCGCGCTATCCGTCGTAACCGGATCGGCTTTAACAAGTCCGGTCGGCC GATTGGGTCCTTCCTATTCGTTGGCCCAACAGGTGTCGGCAAAACTGAACTGGCTAAACAGCTTGCCAAAGAGCTGTTTG GTTCTGAAGACGCCATGATCCGGTTTGATATGTCGGAGTACATGGAGAAATTCAGTGTCTCCAAGCTTATCGGGTCACCG CCAGGCTATGTCGGGTATGAGGAAGCCGGTCAATTAACTGAAAAAGTTCGCCGAAATCCTTATAGCCTCATCTTGTTAGA TGAAATTGAAAAAGCCCATCCAGATGTGATGAATATGTTCTTGCAGATCTTGGATGACGGCCGATTGACTGATTCTCAAG GCCGTACCGTTTCCTTCAAGGACACGATCATTATCATGACATCCAATGCTGGCTCAACCGATGCCGAAGCAAACGTTGGT TTTGGCGCAGCTTTAAGCGGTAAGACGCACAGTGTGCTGGATCAGCTTGGTAATTACTTCAAGCCTGAATTCCTGAACCG ATTTGATGACATCGTTGAATTCAAGTCATTGTCTAAAGACGACTTGTTGAAGATTGTGTCACTGATGATTCAAGATACCA ACAATAACATCAAGGATCAGGGCTTGACGATTCATGTTACCGATCCGGTTAAGGAAAAGCTGGTTAATCTCGGTTACAAT CCTGCCATGGGAGCTCGGCCGCTGCGTCGAGTCATTCAGGAACAGATTGAAGACCGCGTTGCTGACTTCTACCTTGACCA TCCAAAGGCTAAGGAACTTGAAGCCCGCATCAGTAATGGTGAGATTACGGTTGGTGAACCTGCCAAGGCTGAAACCACTC AAAAAGCTAAAAAGTAA Protein sequence : MRPTDATDPFGFGSLDDIFRAMNQGMDQPQQPNAQTPPTQAGRGGNGNNGRNGNRGKGLLGQFGVDLTEQARNGQIDPVI GRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIANGDVPSKLQDRHVIRLDVVSLVQGTGIRGQFEQRMQQ LIDELKKNKNIILFIDEIHEIVGAGNAEGGMDAGNVLKPALARGELQLVGATTSNEYRQIEKDSALARRLQPVLVEEPTV EETIKILKGLQPRYQDFHHVKYTDAAIEAAATLSNRYIQDRFLPDKAIDLLDESGSRKNLTIATVDPETIKTKIDDAEKQ KQAALKQEDYEKAAFYRDQVTKLEDMAKKQSTLPENEIPTVTEKDMEQIVEEKTNIPVGELKAQEQAQLKNLAGDLEKHV IGQNEAVDKVARAIRRNRIGFNKSGRPIGSFLFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSP PGYVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSTDAEANVG FGAALSGKTHSVLDQLGNYFKPEFLNRFDDIVEFKSLSKDDLLKIVSLMIQDTNNNIKDQGLTIHVTDPVKEKLVNLGYN PAMGARPLRRVIQEQIEDRVADFYLDHPKAKELEARISNGEITVGEPAKAETTQKAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-151 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_001987917.1 | ATP-dependent clp protease ATP-binding protein | VFG0080 | Protein | 0.0 | 64 |
| clpE | YP_001987917.1 | ATP-dependent clp protease ATP-binding protein | VFG0079 | Protein | 6e-150 | 52 |
