|
Name : polA (LCABL_19280) Accession : YP_001987865.1 Strain : Lactobacillus casei BL23 Genome accession: NC_010999 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1863929 - 1866574 bp Length : 2646 bp Strand : - Note : - DNA sequence : ATGGCGAGCAAAACAAAATTATTATTAGTCGATGGTAACTCAGTCGCATTTCGTGCATTTTTTGCTTTATATAATCAATT AGACCGTTTTACGAACCAAGATGGCTTGCACACCAACGCCATTTATGCGTTTAACAACATGCTCGAGATTGTTTTAAAGG CAGTCCAACCAGATGCCGCTTTAGTAGCATTTGATGCAGGCAAGACGACTTTTCGCACAGCCAAATATGCTGATTACAAA AGTGGTCGCGCCAAGACACCGAGCGAATTGCTGGAACAATTGCCTTATATCAAGGAATTGTTGGATGACATGGGCATCGC GCATTATGAATTAAAGGATTACGAAGCCGATGACATTATCGGCACAATGGCTAAGCGTGCGGATGAGGCCGGCTGGGAAA CGACGATTGTCACTGGTGATCGCGATTTGACGCAGCTGACGACCGATCGGACCACAGTTCAAGTGACAGTGAAGGGTGTC AATGAGCTTGAAGCTTACACCCCAGCACATGTCAAAGAAAAGCTTGGCATCACACCGGCTCAAATTATTGATCTCAAAGG TTTGATGGGTGATACCTCGGACAACTATCCTGGGGTGACCAAGGTCGGTGAAAAAACAGCTCTGAAATTGCTCAATCAAT ACGGAAGCATGGAAAACCTCTATGCTAATGTGGATGACATGAAAAAGAGCAAACTTAAAGAGAATTTGATTAACGATAAA GATAGCGCTTTCTTAAGCAAACAGTTGGCAACGATCGATCGCGATGCACCGCTTACTGTGGACTTAGCGGATGTGACATA TGCTGGACCGGATTTAGACAAACTCCGGGACTTCTATACAAAAATGAATATGAATTCGTTGCTCAAAAAAATCGGTGGTA GTGTCGCTAAACCTGTTCAGGCGGTTCATTTTTCCGTGCTGGATGAGCAATCGATTCTTGCACTCACCAAGCTGACCGAA CCTCTGACTTTTGAGATTGAAATGCTCGAGGATAATTATCATGTGGCCGAACAAATCGGTTTCTTTATTGGCACTAAGGA AGAAACTTACGTGAGTACCGATATCACCTTGCTGACGCTGCCAGCGGTTAAACGGTGGCTGGAAGATGCCAAACGAGATC TGACAGTTTTTGATGGCAAACGAAACATCGTCGCCGCTAATCGACTCGGCGTGAAATTACCGGATATCGCTTTTGACGTG TTATTAGCGTCCTATTTGATTAATCCTGACGAAAACAGCAATGATTTGGGTAAAATCGCTGAAGATCACGATTATCATGA CTTGCCGCGTGATGAGGATATTTATGGCAAAGGCGCCAAACGGCAAGTGCCAGAAGACGATAAGCTGTTTGGCCAGTTTG CTCGCAAGTCTAATGCTTTGTTCGCATTGCGGCCTGATTTGACTGGCGATTTGGAAAAGCAGGCCCAAACAGACTTATTC ACTGATATGGAAATGCCGCTTTCTCGGGTTTTGGCAGAAATGGAAATTCAAGGGATTACCCTAAATGCTAAAACGCTGAA GGCTATGGGCACTGAATTCTCACAAAGCATCAAGATTTTGGAAGAGAAAATCTATGCAGAAGCTGGCGTGAAGTTCAATT TGAACTCACCAAAGCAGCTCGGCGAAATTCTTTTTGAAAAATTGAATCTGCCTGTGATCAAGAAAACGAAGACCGGTTAC TCGACAAGCGTTGACGTGTTGAACGAATTGAAATCGGCAAGTCCGATTGTGCAGGACATTTTGGATTATCGCGGCTGGGC GAAATTAAATTCGACTTATGTTGTCGGCTTGTTGAAGGCGCAATTGCCTGATCATAAGATTCATACCCGCTATTTGCAGA CTTTGACGCAAACTGGCCGACTGAGCTCAGTTGATCCTAACATGCAGAATATTCCTGCTCGTGATGAAGGTAAGATTATT CGCAAGGCCTTTGTACCGTCACATGAAGGTTGGCAAATTTTTAGTTCTGACTATTCCCAAATCGAGTTGCGGGTGTTGTC GCATATTTCCGGGGATGAGAATATGCAGGAGGCGTTTAAACATGGCGTCGACATTCACGCCAACACTGCGATGAAGATTT TTGGCCTGAGTTCGCCAGATCAAGTCACACCTGATATGCGGCGGCAAGCCAAGGCAACTAACTTCGGTATTGTGTATGGC ATTAGTGACTATGGTCTATCCCAAAACATTGGCATTTCCCGTAAACAGGCAAAAGCGTTCATTGATGGTTATTTTGATCA ATATCCTAAGGTTCATGATTATATGGATGCGATGGTCAAGAAGGCGCGTGAAGACGGCTATGTCGAAACCCTGTTCCATC GGCGGCGCTATCTGCCACAAATTCACTCACGCAACTTTAATCTGCGTAAGTTTGCCGAGCGGACCGCTATGAATACGCCG ATTCAGGGTAGCGCTGCGGATATTATCAAGGTAGCCATGATTCGCATGCAAAAGGCCTTGGATGAGGCCGGTTTGCAAGC TAAAATGCTTCTACAGGTTCACGATGAACTCATCTTCGAGGCACCTGAAGAAGAAATTGCCCAGCTTAGCGAGCTCGTGC CAAAAGTCATGGACTCAGCAGTTCACCTTGATGTGCCATTAAAGGTTGAAAGTCATTATGGACCAACTTGGTTCGACGCT AAATAA Protein sequence : MASKTKLLLVDGNSVAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKAVQPDAALVAFDAGKTTFRTAKYADYK SGRAKTPSELLEQLPYIKELLDDMGIAHYELKDYEADDIIGTMAKRADEAGWETTIVTGDRDLTQLTTDRTTVQVTVKGV NELEAYTPAHVKEKLGITPAQIIDLKGLMGDTSDNYPGVTKVGEKTALKLLNQYGSMENLYANVDDMKKSKLKENLINDK DSAFLSKQLATIDRDAPLTVDLADVTYAGPDLDKLRDFYTKMNMNSLLKKIGGSVAKPVQAVHFSVLDEQSILALTKLTE PLTFEIEMLEDNYHVAEQIGFFIGTKEETYVSTDITLLTLPAVKRWLEDAKRDLTVFDGKRNIVAANRLGVKLPDIAFDV LLASYLINPDENSNDLGKIAEDHDYHDLPRDEDIYGKGAKRQVPEDDKLFGQFARKSNALFALRPDLTGDLEKQAQTDLF TDMEMPLSRVLAEMEIQGITLNAKTLKAMGTEFSQSIKILEEKIYAEAGVKFNLNSPKQLGEILFEKLNLPVIKKTKTGY STSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKAQLPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKII RKAFVPSHEGWQIFSSDYSQIELRVLSHISGDENMQEAFKHGVDIHANTAMKIFGLSSPDQVTPDMRRQAKATNFGIVYG ISDYGLSQNIGISRKQAKAFIDGYFDQYPKVHDYMDAMVKKAREDGYVETLFHRRRYLPQIHSRNFNLRKFAERTAMNTP IQGSAADIIKVAMIRMQKALDEAGLQAKMLLQVHDELIFEAPEEEIAQLSELVPKVMDSAVHLDVPLKVESHYGPTWFDA K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 54 |
