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Name : nrdE (LCABL_16920) Accession : YP_001987631.1 Strain : Lactobacillus casei BL23 Genome accession: NC_010999 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 1630567 - 1632738 bp Length : 2172 bp Strand : + Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : ATGTCATTAAAAACAATTAGTCCGGATCAAGTCACCTATTACGCGCTCAACAACGAGATCAACATTCCTGTGAATGACCA GATTCCGTTGAACAAAGACAAGGAAGCGTTGCAGGCATTTTTGACCGAAAATGTAGCGCCAAATACGATGCAATTTGATT CGCTGGCTGATCGACTGAAGTATTTAGTCGATAACCACTATTATGAAGCCGACTTTTTGAACAAGTATCAGCCAGCTTTT TTGGAAAAACTGGATCAATTTCTTTCAGCGCAGCATTTTCAGTTCAAATCCTTCATGGCCGCCTACAAATACTATGCACA GTATGCCTTGAAAACCGATGACGGTACCCAGTATTTAGAAGATTTTAAAGATCGGGTTTTTGCCAACGCACTTTTCTTTG CAGACGGTAACGAGGACTTGGCAGTTGACCTTGCTGATGAAATGATTCATCAACGTTATCAACCGGCCACCCCTTCCTTC TTGAATGCTGGCCGGGCCCGCCGTGGCGAACTGGTTTCATGTTTTTTGTTGCAAATCACTGATGACATGAATTCAATTGG CCGGGCGATCAATTCGGCCTTGGAATTGTCCCGAATTGGTGGCGGCGTTGGCCTCACCTTGTCCAACCTACGTGAAGCCG GTGCCCCGATTAAGGGCATTGAAGGTGCCGCTAGCGGCGTCTTGCCAGTCATGAAGCTGTTGGAAGACTCTTTTTCCTAT AGCAACCAATTGGGCCAGCGACAAGGTGCCGGTGTTGTGTATCTGAACGTTTTCCATCCTGACATCATCAGTTTCTTAGG TGCCAAGAAGGAAAACGCGGACGAAAAGTACCGGGTTAAAACACTCAGTCTTGGCGTTGTCGTTCCGGATAAGTATTATG ACCTCATTAAGGCTAATGCCGATATGTACCTCTTCTCCCCTTACTCGGTTGAACGGGTTTACGGGAAGCCGTTCTCTTAT GTTGATATCACCAAGGAATATGACAACATGGTTGCCAATCCGGCCATTAAGAAGTACAAGATTAAGGCCCGTGATCTAGA AAACGAAATCTCCAAACTTCAGCAGGAATCTGGTTATCCTTATATTATCAACATTGATACGGCAAATCGCGCCAACCCAA TCGAAGGCAAAATCATCATGAGTAATCTGTGCTCGGAAATCATGCAGGTTCAGGTGCCTTCCAAGTTGAACAATAAACAG GAATATGAAGTGCTGGGTACTGATGTATCTTGCAACTTAGGTAGCACGAATATTCCCAACCTGATGCATAGCCGCGACTT TGGCCGCAGTGTCGAAGCAATGGTTCGTGCTTTGACTTATGTCACGGACCACAGCAACATCGACGTTGTACCTTCCGTCC AGCACGGTAATCACCAGGCTCACAGCATTGGCCTTGGTGCGATGGGCTTGCACACTTATTTTGCGAAGAATCATATGTTC TACGGTTCGCCTGAAAGCTTGGACTTCACCAATATTTACTTCCTTTTGCTGAATTACTACACCTTGAGGGCATCCAATAA AATTGCCCAAGAACGCGGCGAAAGCTTCCACAACTTCGAAAACAGCAAGTATGCGGACGGTAGCTACTTCGATAAGTACA CCGAACAAGTATGGGCACCGAAGTATGACAAGGTTCGCGCGCTGTTTGATGGCATTCACATTCCGACGCAGGCTGATTGG GAAGCGCTGAAGACCAGTGTCATGAAAGATGGTCTCTACCATCAGAACCGCATGGCTGTTGCGCCAAATGGGTCGATCAG TTACATCAACGACACCAGTGCATCATTACAGCCGATCGTTAACCGCATTGAAGATCGGCAAGAAAAGAAGATCGGCACGA TTTACTACCCTGCTCCAGACCTTTCTAATGACACGATGCCTTACTATCAAAGTGCCTATGATATTGATATGCGTAAAGTG ATTGACGTTTACGCTGCTGCCCAGCAGCATGTCGATCAAGGAATGGCCATGACGTTGTTCATGCGCAGTACCATTCCGGC TGGCCTTTATCCTTGGAAAGATGGCCGAACCGATAAAATGACCACCCGTGATTTAAATATTTTGCGTAATTACGCACATC ATAAGGGCATCAAGTCGATTTACTACATCCGGACTTACACGGATGATCAAGAAGAAATCGGCAGCAACGCTTGTGAAAGC TGCTCAATCTGA Protein sequence : MSLKTISPDQVTYYALNNEINIPVNDQIPLNKDKEALQAFLTENVAPNTMQFDSLADRLKYLVDNHYYEADFLNKYQPAF LEKLDQFLSAQHFQFKSFMAAYKYYAQYALKTDDGTQYLEDFKDRVFANALFFADGNEDLAVDLADEMIHQRYQPATPSF LNAGRARRGELVSCFLLQITDDMNSIGRAINSALELSRIGGGVGLTLSNLREAGAPIKGIEGAASGVLPVMKLLEDSFSY SNQLGQRQGAGVVYLNVFHPDIISFLGAKKENADEKYRVKTLSLGVVVPDKYYDLIKANADMYLFSPYSVERVYGKPFSY VDITKEYDNMVANPAIKKYKIKARDLENEISKLQQESGYPYIINIDTANRANPIEGKIIMSNLCSEIMQVQVPSKLNNKQ EYEVLGTDVSCNLGSTNIPNLMHSRDFGRSVEAMVRALTYVTDHSNIDVVPSVQHGNHQAHSIGLGAMGLHTYFAKNHMF YGSPESLDFTNIYFLLLNYYTLRASNKIAQERGESFHNFENSKYADGSYFDKYTEQVWAPKYDKVRALFDGIHIPTQADW EALKTSVMKDGLYHQNRMAVAPNGSISYINDTSASLQPIVNRIEDRQEKKIGTIYYPAPDLSNDTMPYYQSAYDIDMRKV IDVYAAAQQHVDQGMAMTLFMRSTIPAGLYPWKDGRTDKMTTRDLNILRNYAHHKGIKSIYYIRTYTDDQEEIGSNACES CSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 0.0 | 53 |
