Gene Information

Name : clpP (LCABL_11100)
Accession : YP_001987053.1
Strain : Lactobacillus casei BL23
Genome accession: NC_010999
Putative virulence/resistance : Unknown
Product : Clp protease domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : 3.4.21.92
Position : 1062115 - 1062822 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
ATGACGACAGTGGTACCGATTAAAGGTGACATCGTTACTAATGATTACGGATGGCTTTACGATCTATTTGGCGATGACTA
TGCTTCACCTAAAAGCGTCTCTGATCTAATTAACAAGGCTAATGGTGACGACTTATCCGTTGAGATCAATTCAGGTGGAG
GAATTGTCGATGCCGGCTCTGAAATTTACACCATGCTTCGTGCTTATAAAGGGCCGGTCAATGTGAACGTTGTGGGTGTG
GCATATTCCGCTGCATCTTTGATCGCGATGGCGGGTGATGTCGTAGCCATGTCACCTGCAGGGATGATGATGATCCACAA
TGTCTCCGGTGGACAGATGGGTGACTATCATGACATGGAGAATGCTGCGGATTTGTTAAAGAAGTCAAACACAGCAATAG
CTAATGCCTATATGGCCAAGACGGGTCTATCTCAAGCAGAAATCCTTGACTTGATGGATTCAACTTACTGGCTGGATCCG
CAGACTGCCATTGAAAAAGGGTTTGCTGACAAGATGATGTTTGACAATGCGGAGAAGCCAGGGAAAATGATCATGACTGC
TAGCCTGAATAAGATTCCAAGTCTTGCCACGCTGAACCAAATGAAACACTTCCGAAACACAACAGCACTAAAAAGAGCGC
CGTCTGATGATGATCAGATGGCGCTTTTGAATGCAGAATACAATCTCTTAAATTTGAAAGGGGAATAA

Protein sequence :
MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGV
AYSAASLIAMAGDVVAMSPAGMMMIHNVSGGQMGDYHDMENAADLLKKSNTAIANAYMAKTGLSQAEILDLMDSTYWLDP
QTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKRAPSDDDQMALLNAEYNLLNLKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-27 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 4e-27 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 4e-27 42
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 3e-27 42
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 4e-27 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 4e-27 42