Gene Information

Name : RHECIAT_PA0000100 (RHECIAT_PA0000100)
Accession : YP_001985709.1
Strain :
Genome accession: NC_010998
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 113205 - 114872 bp
Length : 1668 bp
Strand : +
Note : ypa00040

DNA sequence :
ATGGCTCTTTCCCTGGTCAATTCCTTCGCCCCGCCCGTCCGCCACGATCATGACGGCCGTTCTGAGACGCCGATCATCGA
CGCCCGCAATGTCGCGGTGAATTTCAAGGTCGAGGACGGCATGGTCGAAGCCGTCAAGGACGTCTCCTTCCAGCTCTATC
GCGGCGAGACCATCGCCATCGTCGGTGAATCCGGCTCCGGCAAATCAGTGACCGCGCGCACGGTGATGGGGCTGTTGTCG
AAGCGCGCCGTCGTCTCCGGCAATTCGACCGTTTCCTATGACGGCAGCAATATCCTGAAATTCTCCGAGCGGGCCCGCCG
CAAGCTGCGCGGCGACCGCATTTCGATGATCTTCCAGGAGCCGATGAGCTCGCTGAACCCGATCTATACGATCGGCAGCC
AGATCGTCGAGGCGATCCGCGTGCATCGCCGGATGAGCCGCGGGCAAGCGGAAAAACGGGCGCTCGAACTGCTCGAACAT
GTGCAGATCCCTGACCCCGCCGCGCGGCTGAAGCAATATCCGCATCAGCTTTCCGGCGGCCAGCGCCAGCGCGTGATGAT
CGCCATGGCGCTCGCCAACGATCCCGACGTGCTGATCGCCGACGAGCCGACGACGGCGCTCGACGTCACCGTGCAGGCGC
AGATCCTCAACCTGATCCGCAACCTGCAGAAGGAATTGGGGATGGCGGTCATCCTCATCACCCACGACCTGACGGTGGTG
CGCCAGTTCTCCGACTACGTCTATGTGATGCAGCATGGCGAGGTGCGCGAGCACAATGTCACCGAAGCGCTGTTTGCCAA
TCCGCAGCACGCCTATACCAAACACCTGCTCGCCTCCGAGCCGCGCGGCCAGGCCAATCCGCTGCCGGAGGGATCGGATA
TCATCCTCGACGCCAAAGGCGTGCGCGTCGGCTTCATGATGCGCCACGGCACTTTCCTGAAGCCCGAAATGCGCGAACTC
GTCGCCGTCGACAGCCTGAGCCTGACGCTGCGCCGTCACGAGACGCTTGGCCTCGTCGGCGAATCCGGCTCCGGCAAGAC
CACCTTCGGCCAGGCGATCCTGCGGCTGAACACGCCCCAGGCCGGCGAGATCCATTTCGACCGCCAGCCGATCCACGGGT
TGTCCCGGGCCGAGATGCGGCCGCTGCGCGCCCGCATGCAGATCGTCTTCCAGGACCCGTTCTCCTCGCTCAACCCCCGC
ATGACGATCGGCCAGATCATCGAGGAAGGCCTCGTCGTCAACCGGCTCGGCGCCACCAGGGGCGAGCGGCAGGACCGGGT
GCGCGAGGCGCTGATCTCGGCCGGCATGCCCGGCAATATCCTCTCGCGTTTCCCGCATGAATTTTCCGGCGGCCAGCGCC
AGCGCATCGCCATTGCCCGCGCCATCGCGCTGGAGCCGGAATTCATCCTGCTCGACGAGCCGACGTCAGCCCTCGACCTT
TCCGTCCAGGCGCAGATCATCGAGCTGTTGCGCAAGCTGCAGGACGAGCGGGGCCTGAGCTACCTCTTCATCTCCCACGA
TCTCAAGGTTGTGAGGGCGCTCTGCCACCGCGTCATCGTCATGCAGCATGGCAAGATCGTCGAGGAAGGTCCCGTCAACG
AAGTTCTCACCCATCCCAAGACCGCCTACACCGAACGGCTCGTCAAAGCCGCTTTCGAGGTAGCATGA

Protein sequence :
MALSLVNSFAPPVRHDHDGRSETPIIDARNVAVNFKVEDGMVEAVKDVSFQLYRGETIAIVGESGSGKSVTARTVMGLLS
KRAVVSGNSTVSYDGSNILKFSERARRKLRGDRISMIFQEPMSSLNPIYTIGSQIVEAIRVHRRMSRGQAEKRALELLEH
VQIPDPAARLKQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRNLQKELGMAVILITHDLTVV
RQFSDYVYVMQHGEVREHNVTEALFANPQHAYTKHLLASEPRGQANPLPEGSDIILDAKGVRVGFMMRHGTFLKPEMREL
VAVDSLSLTLRRHETLGLVGESGSGKTTFGQAILRLNTPQAGEIHFDRQPIHGLSRAEMRPLRARMQIVFQDPFSSLNPR
MTIGQIIEEGLVVNRLGATRGERQDRVREALISAGMPGNILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL
SVQAQIIELLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQHGKIVEEGPVNEVLTHPKTAYTERLVKAAFEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-79 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-100 43