Gene Information

Name : virB9c (RHECIAT_PC0000902)
Accession : YP_001985522.1
Strain :
Genome accession: NC_010997
Putative virulence/resistance : Virulence
Product : transport secretion system IV protein, VirB9
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3504
EC number : -
Position : 993052 - 993906 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence :
TTGAGATCGCACGTTTTCCTTCCGCTTATCCTTGCCGGCAGCCTCTCCTCGCCGGTGCTCGCCCTCGAAACGCCACGCGG
TGCGGCGCAGGATAGCCGCATTCGCTTCGTCGATTATCAGCCCTATAACATCACCAAGGTGGTCGGCACGCTCCGCTCCT
CCGTTCAGATCGAATTCGCCGCCGATGAAGAAATCGCCCATGTCGCGCTCGGCAACAGCGTTGCGTGGGAGGTGGCGCCG
GCCGGCAACATTCTTTTCCTGAAGCCTCGGGAAAATCAGCCTGTGACGAATATCTCGGTCGTCACGACACGGCGGGATGG
ATCGACCCGCAGCTATCAGATGGAGCTCACCGTCCGTGACGGCAGCGTCGAGGCCGGGCAGAACACCTATTTCTATGTGA
AATATCGCTACCCAGCTGACGAAGCCGAGCGGCGCCGGCAGGAGGCAGTTACGCGAGCCCAGGCGGCGCAGGCCGGCGAG
GCCGATCGCGTACTTGCCCTTCATGAAGCTTTTGGACCGCGCAATTGGCGCTATTCGGCGCAGGGATCCCAGGCGCTCGA
GCCGCAAGCCGTTTATGACAACGGCAAGGTCACGAGCTTCGCCTTTGTCGGCAACCAGGAAATGCCGGCGATCTATATGG
AAAACTCCGACGGCAGCGAAAGCCTGGTTCCGAAGTCCGTAGACGGAAATCTCGTCCTCGTTCATGCGATCAGCCGCAAG
TTCATCCTGCGCCGGGGAGGCGACGTCCTCTGCGTCTTCAACGAAGCCTACGATCGCGTCGGCATCAATCCCGAGACCAA
CACGACGTCACCGTCGGTCAAGCGCGTCGTCAAGGCGCCGCAAGATGCGCAATAG

Protein sequence :
MRSHVFLPLILAGSLSSPVLALETPRGAAQDSRIRFVDYQPYNITKVVGTLRSSVQIEFAADEEIAHVALGNSVAWEVAP
AGNILFLKPRENQPVTNISVVTTRRDGSTRSYQMELTVRDGSVEAGQNTYFYVKYRYPADEAERRRQEAVTRAQAAQAGE
ADRVLALHEAFGPRNWRYSAQGSQALEPQAVYDNGKVTSFAFVGNQEMPAIYMENSDGSESLVPKSVDGNLVLVHAISRK
FILRRGGDVLCVFNEAYDRVGINPETNTTSPSVKRVVKAPQDAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB9 YP_001610349.1 VblB9 protein Virulence Not named Protein 9e-81 65
virB9 YP_001610005.1 VirB9 protein precursor Virulence Not named Protein 7e-78 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB9c YP_001985522.1 transport secretion system IV protein, VirB9 VFG2238 Protein 1e-75 56