Gene Information

Name : virB10c (RHECIAT_PC0000901)
Accession : YP_001985521.1
Strain :
Genome accession: NC_010997
Putative virulence/resistance : Virulence
Product : transport secretion system IV protein, VirB10
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 991868 - 993043 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGAGGAAGAGATTATCCAGATCCCCGGTGAGCGCGCCGAGACGTCGGCCGGCGGCCGGCTCGACAACAATCCCAT
CCTCAAACGCGGCGCTGTCGCTGTCGCGATGGTGGTCTTTGTCGCCTTCGCGCTCTGGTCGATGCGCGGGCAGGACAAAC
CGTCGGATAGTGCCCAGCCCGAACGGGTGGTCATCCGCCAGACTTCGGATTTCGAACCGGCCAAGGAGCCGGTCCAGCCG
ACAGCGACTCTGCCGCAGGTCCAGCTCCCGACGCCTGTTGCTACCGAACAGGCGCCGACGGACGATGACAAACTGCTCGA
TGCTGCCCGCCGTGCGCCGGTCATCGCTTATGGCGGCGAGAAGGCGCCGTCGACTCGGCGCCAGGATCAGGACAGGACCT
CGGATCAAGCCTCGGACTACGTGCAGCTCGGCGCCAATCCCGGCGGCTTCGCCTCGCAGGGCGAAAACGAAGACCAGCGC
TTCAGCCGCTTGCTGACGCCGACGCAGTTGCAGGGATCGCGCGCCGGCACGCTGGGCAACCGCGATTTCATCGTCGCGAT
GGGGACATCCATTCCTTGCGTTCTCGAGACCGCGCTCTCCTCCGATCAGCCGGGGTTCACCAGCTGCGTCATCAACCGCG
ACGTTCTTTCGGATAACGGCCGCGTCGTGCTGATGGAAAAAGGCACGCAGGTCGTCGGTGAATATCGCGGCGGCATCCGC
CGTGGACAGAAGCGCCTGTTCGTCCTCTGGAACCGGGCGAAGACCCCGAAGGGCGTGATCATCACTTTGGCGTCGCCGGC
AACCGATGCCCTCGGCCGGGCCGGCGTCGACGGCTATGTCGACACCCATTGGTGGGAGCGTTTCGGCAGCGCGATCCTGC
TGTCGATCGTCGGCGACACGACCTCCTACGCCAGCAGCCGGCTGCAGGACAGCGATGTCGAAGCGCAAAACACCACCAGC
GCCGGCCAGCAGGCCGCGGCGATCGCCGTCGAGCAATCGATCAACATTGCGCCGACCCTCATGAAGCATCAGGGCGAGCT
GGTTTCGATCTTCGTCGCGCGTGATCTCGATTTCTCCAGCGTCTACCGGCTTCGCGTAACGGAGCCCGGCAACCGCATCT
ACGACCGCGCCGTGCTCGGAGATTTCGCGCCGACGTCGAAGATCGTGACAAAATAG

Protein sequence :
MVEEEIIQIPGERAETSAGGRLDNNPILKRGAVAVAMVVFVAFALWSMRGQDKPSDSAQPERVVIRQTSDFEPAKEPVQP
TATLPQVQLPTPVATEQAPTDDDKLLDAARRAPVIAYGGEKAPSTRRQDQDRTSDQASDYVQLGANPGGFASQGENEDQR
FSRLLTPTQLQGSRAGTLGNRDFIVAMGTSIPCVLETALSSDQPGFTSCVINRDVLSDNGRVVLMEKGTQVVGEYRGGIR
RGQKRLFVLWNRAKTPKGVIITLASPATDALGRAGVDGYVDTHWWERFGSAILLSIVGDTTSYASSRLQDSDVEAQNTTS
AGQQAAAIAVEQSINIAPTLMKHQGELVSIFVARDLDFSSVYRLRVTEPGNRIYDRAVLGDFAPTSKIVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 3e-81 53
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 4e-70 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB10c YP_001985521.1 transport secretion system IV protein, VirB10 VFG2239 Protein 4e-79 53