Gene Information

Name : RHECIAT_PC0000420 (RHECIAT_PC0000420)
Accession : YP_001985048.1
Strain :
Genome accession: NC_010997
Putative virulence/resistance : Unknown
Product : putative oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 447082 - 448803 bp
Length : 1722 bp
Strand : -
Note : ypc00261

DNA sequence :
ATGACCGATATCGTTTCTATTGCCGGCAAGCCGCTGCTTCAGGTGAAAAACCTGACCGTCGAATTCCCGTTGCGCACCGG
TATTTTTCGCGCCGTCAACGATCTGTCTTTCTCGATCGAACCGGGCAAGACGCTCTGTGTCGTCGGCGAGAGCGGATCCG
GCAAGTCGGTGACCGCCCGTTCGATCCTGCAGATCGTCGATGCGCCCGGCCGAATCGCGGCAGGATCAATCGTCTTGAAC
GATCAGAACGGCGGCTCGACCGATCTGACCAGCCTCAATCCACGCGGGCGCCAGATCCGGGCGATCCGCGGCCGCGACAT
CGCCATGATCTTCCAGGAGCCGATGTCGTCGCTGTCGCCGATCCACACGGTCGGCAACCAGATCGTCGAAGCGCTTCGGC
TGCACACAAGGATGAGCAAGGCGGAGGCGCGGGCCGAGGCCATATCGCTGCTGAAGCAGGTCGAGATCCCCTTTCCGGAG
AAAGCGCTGGATCGCTATGCGTTCCAATATTCCGGCGGCATGCGTCAGCGTGCGATGATTGCCATGGCGCTTGCCTGCAA
GCCGCAGCTTCTGATCGCCGACGAGCCGACCACGGCCCTCGACGTGACGACCCAGGCCGAAATCCTCGACCTGATCGCCC
GCCTGCAGAAGGCGAACGGCATGGCCGTTCTCTTCATCACCCATGATATGGGCGTCGTTGCACAGATCGCCGACGACGTG
CTCGTCATGCACAACGGTGTGGCGAAGGAATACGGGCCGGTCGAGCAGATCTTTCATGCGCCGAAAGACGACTATACCCG
CATGCTGATCGGCTCGGTGCTGAAGCTGGAGCAGAAGGCCGAAATCCGCTTGGCGCGCGCGCCGCTCGACAGGACGGCAG
CGCCGATCCTCGAACTGCGCAATCTGTCGATGAATTTCGGCGACGTGAAAGCGCTGGACGATGTCTCCATTTCGCTGCTG
CCGGGCGAGACGCTCGGCATTGTCGGCGAAAGCGGATCCGGCAAGACGACGATGGGCCGTTCGATCATGCGGCTGCTCGA
TCCGACCGCCGGCGAAATCCTCTACCGCCGCGCCGGCGGCGACGTCATCGATCTGGCAACAGCCAAGGGCCAGACGCTTG
CCGCTGCGCGGCGGGAATTGCGCATGGTGTTCCAGGATCCGTTCGGCTCCCTCAATCCACGCATGACCGTTTCCCAGATT
ATCGGCGAGCCGTTGCTCGTCAATGGCATCGCAAAGGGACGGGCGCTGGACGAGCGCGTCTGCCAGCTCATGGAGCAGGT
CGGCCTCGATCCGAGGGCGCGCGAACGCTACCCCCACGCCTTCTCCGGCGGCCAACGTCAGCGCATCGGCATTGCCCGCG
CCATCACGCTCAATCCGCGTGTCATCGTTGCCGACGAAGCGACCTCGGCGCTCGACGTCTCCGTGCGCTCGCAGGTTCTC
GATCTGCTGATGCGCCTGCAGGATGAACTCGGACTCGCCTACATCTTCATCAGCCATGATATCGGCGTCATCCGCTACAT
GTGCGACCGCGTGGGCGTCATGTACAAAGGCCAGCTCGTCGAAATCGGCGATGCGGAGAAGGTCTGTAATACGCCCGAGC
ACGCGTACACCCAGGCGCTGATCTCGGCAATCCCGCGCCCCGATCCGCGGGACCGCGATCATTCCAGGCGCTTCCGTTAC
GTCGCGCCCGACAGTCTGAAGAATGGAAGTTCTCAGAGATGA

Protein sequence :
MTDIVSIAGKPLLQVKNLTVEFPLRTGIFRAVNDLSFSIEPGKTLCVVGESGSGKSVTARSILQIVDAPGRIAAGSIVLN
DQNGGSTDLTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIVEALRLHTRMSKAEARAEAISLLKQVEIPFPE
KALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFITHDMGVVAQIADDV
LVMHNGVAKEYGPVEQIFHAPKDDYTRMLIGSVLKLEQKAEIRLARAPLDRTAAPILELRNLSMNFGDVKALDDVSISLL
PGETLGIVGESGSGKTTMGRSIMRLLDPTAGEILYRRAGGDVIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQI
IGEPLLVNGIAKGRALDERVCQLMEQVGLDPRARERYPHAFSGGQRQRIGIARAITLNPRVIVADEATSALDVSVRSQVL
DLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYKGQLVEIGDAEKVCNTPEHAYTQALISAIPRPDPRDRDHSRRFRY
VAPDSLKNGSSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-82 43