|
Name : thiC (RHECIAT_PC0000245) Accession : YP_001984876.1 Strain : Genome accession: NC_010997 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 248728 - 250560 bp Length : 1833 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATATTGTTGCACCCCAGCTTACTCCTGTCGTCACCACCGGCTCGCTTCCGGCCTCGACCAAGGTCGTCAAACCCGG AACGCTCTATCCGGATCTGCGCGTGCCGATGCGCGAAATCAGCCTTCACCCGACCTCCGGCGAGCCGCCGGTCACGGTCT ATGATTCCTCCGGCCCCTATACCGATCCGGCCCATGTGGTTTCCATCGACGCCGGGCTGCCGCGTTTGCGCGAGTCCTGG GTCAGGGCGCGTGGCGACGTTGAAACCTATGAAGGCCGGCTGGTGAAGCCTGAAGACAATGGTTTTGCCACGGGCGAACG GCTGACGCCGGAATTTCCCATTCGCAACACGCCGCTAAAGGCAAAGGCCGGCCGCGCTGTCACCCAGCTCGCCTATGCGC GTGCCGGCATTATAACCCCGGAAATGGAATTTATCGCGATCCGCGAAAACCTCGGCCGGCAGGCCGCGAAGGAGGCGCTC GCCCGCGACGGCGAGAGCTTCGGCGCTCATGTTCCGGATTTCGTGACGCCCGAATTCGTGCGCCGGGAAGTCGCCGAGGG CAGGGCGATCATCCCGGCCAATATCAACCACCCCGAATCCGAACCGATGATCATCGGCCGGAATTTCCTGGTGAAGATCA ACGCCAATATCGGCAATTCGGCCGTCACCTCGTCGATGGCGGAAGAGGTGGAAAAGATGGTCTGGGCGATCCGCTGGGGC GCCGACACCGTCATGGACCTTTCCACCGGTCGCAACATTCACAACATCCGCGAATGGATCATTCGCAACTCGCCGGTTCC GATTGGAACCGTGCCGCTTTACCAGGCGCTCGAGAAGGTCAACGGCATTGCCGAAGATCTGACCTGGGAAGTCTATCGGG ATACGCTGATCGAGCAGGCCGAGCAAGGCGTCGATTATTTCACCATACATGCCGGCGTGCGGCTGGCCTATATTCCGCTC ACTGTCAATCGCGTCACCGGCATCGTCTCACGCGGCGGCTCGATCATGGCCAAGTGGTGTTTGCATCATCACAAGGAGAG TTTCCTCTACGAGCATTTCGAGGAAATCTGCGACATCTGCCGTGCCTATGACGTCTCCTTCTCGCTCGGCGACGGTTTGC GGCCGGGGTCGATCGCGGATGCCAATGACGCAGCGCAATTTGCCGAGCTCGAAACCCTCGGCGAACTGACGAAGATCGCC TGGGCGAAGGACTGCCAGGTGATGATCGAAGGCCCCGGCCATGTGCCGATGCACAAGATCAAAGAGAATATGGATAAGCA GCTCAAGGTCTGCGGCGAAGCCCCCTTCTATACGCTCGGACCGCTGACGACCGACATCGCGCCGGGCTATGATCACATCA CCTCCGGCATCGGCGCCGCCATGATCGGCTGGTTCGGCACGGCGATGCTTTGCTACGTCACGCCGAAGGAGCATCTGGGG CTACCCGACCGCAGCAATGTCAAGACCGGCGTGATTACCTACAAGATCGCCGCCCATGCCGCCGATCTTGCCAAGGGACA TCCGGCCGCCCGCATTCGCGACGATGCGCTGTCGCGGGCGCGCTTCGAATTCCGTTGGGAGGATCAGTTCAACCTCTCCC TCGACCCGGATACGGCGCGTTCCTTCCACGACGAGACCCTCCCGAAGGAGGCGCACAAGGTGGCGCATTTCTGTTCGATG TGCGGCCCGAAATTCTGCTCCATGCGAATTTCCCACGACATTCGCGCCGAAGCCCAGAAAGAGGGATTGGAAGCCATGGC GGCCAAGTACCGCGATGGCGGCGATCTCTACATGCCGGTCGCAGAGGTCGCGAAAACGCCCGCCGGAGAATGA Protein sequence : MNIVAPQLTPVVTTGSLPASTKVVKPGTLYPDLRVPMREISLHPTSGEPPVTVYDSSGPYTDPAHVVSIDAGLPRLRESW VRARGDVETYEGRLVKPEDNGFATGERLTPEFPIRNTPLKAKAGRAVTQLAYARAGIITPEMEFIAIRENLGRQAAKEAL ARDGESFGAHVPDFVTPEFVRREVAEGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVRLAYIPL TVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDICRAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIA WAKDCQVMIEGPGHVPMHKIKENMDKQLKVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG LPDRSNVKTGVITYKIAAHAADLAKGHPAARIRDDALSRARFEFRWEDQFNLSLDPDTARSFHDETLPKEAHKVAHFCSM CGPKFCSMRISHDIRAEAQKEGLEAMAAKYRDGGDLYMPVAEVAKTPAGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 69 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 69 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
