Gene Information

Name : virB10b (RHECIAT_PB0000168)
Accession : YP_001984431.1
Strain :
Genome accession: NC_010996
Putative virulence/resistance : Virulence
Product : transport secretion system IV protein, VirB10
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 184452 - 185624 bp
Length : 1173 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGAGGAAGAGATTACCCAGATTCCGGGCGAGCGCGCCGAGACGTCGGCCGGCGGCCGGCTCGACAATAACCCGAT
CCTCAAACGCGGCGCTGTCGCCTTGGCGATCGTCGTCTTTGTCGCGTTCGCTCTCTGGTCGATGCGAGGGCAGGACAAGC
CGTCAGACGGTGCCGAGCAGCAGCGCGTTGTCATCCGGCAGACATCGGATTTCGAACCGGCGAAGGAGCCACAGCCGGTG
GCGACACCGCCGCAGGTCCAGCTCCCGACGCCTGTCGCCGCCGAGCAGGCGCCGACCGACGGCGACAAGCTGCTCGATGC
GGCCCGCCGTGCGCCGGTCATCGCCTATGGCGGCGAGAAATCGCCGGCAACGCGGCGGCAGGATCAGGGCGAGGCGTCGG
ATCAGGCCTCGAATTATGTGCCGCTCGGCAACAATCAAGCAGACCTCGGCTCGCAGGGCGAAAACGAGGACCAGCACTTC
AACCGCTTGCTGACGCCGACGCAACTGCAGGGATCGCGTGCCGGCACGTTGGGCAATCGTGATTTCATCGTCGCCATGGG
GACATCCATTCCCTGCGTTCTCGAGACCGCGCTCTCCTCCGATCAGCCGGGGTTCACGAGCTGCGTCATCAACCGGGACG
TTCTTTCAGATAACGGCCGCGTTGTGCTGATGGAAAAAGGCACGCAGATTGTCGGTGAATATCGCGGCGGAATTCGGCGT
GGACAAAAGCGTCTGTTCGTCCTCTGGAGCCGGGCGAAGACACCGAAAGGCGTGATCATCACTTTGGCGTCGCCTGCAAC
CGATGCGCTCGGCCGCGCCGGCATCGACGGCTATGTCGACACCCATTGGTGGGAGCGGTTTGGCAGCGCAATGCTCCTGT
CGATTGTCGGCGATGCCAGCTCCTACGCAAGCAGCCGGCTGCAGGACGGTGATGTCAACGCGCAAAACACCGCCAGCGCC
GGTCAGCAGGCAGCGGCGATCGCCGTCGAGCAGTCGATCAACATTCCGCCGACGCTCATGAAACATCAGGGCGAGCTCGT
TTCGATCTTCGTGGCGCGCGATCTCGATTTCTCCAGCGTCTATCGGCTTCGCGTGACGGAGCCCCGCAATCGCGTCTATG
ACCGCGCCGTGCTTGGGGATTTCGGCCCCTCCTCGAAGCTCGTGACAAAATAG

Protein sequence :
MAEEEITQIPGERAETSAGGRLDNNPILKRGAVALAIVVFVAFALWSMRGQDKPSDGAEQQRVVIRQTSDFEPAKEPQPV
ATPPQVQLPTPVAAEQAPTDGDKLLDAARRAPVIAYGGEKSPATRRQDQGEASDQASNYVPLGNNQADLGSQGENEDQHF
NRLLTPTQLQGSRAGTLGNRDFIVAMGTSIPCVLETALSSDQPGFTSCVINRDVLSDNGRVVLMEKGTQIVGEYRGGIRR
GQKRLFVLWSRAKTPKGVIITLASPATDALGRAGIDGYVDTHWWERFGSAMLLSIVGDASSYASSRLQDGDVNAQNTASA
GQQAAAIAVEQSINIPPTLMKHQGELVSIFVARDLDFSSVYRLRVTEPRNRVYDRAVLGDFGPSSKLVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 2e-80 53
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 2e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB10b YP_001984431.1 transport secretion system IV protein, VirB10 VFG2239 Protein 2e-78 52