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Name : CJA_3640 (CJA_3640) Accession : YP_001984093.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Unknown Product : type I restriction-modification system specificity subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 4355603 - 4357168 bp Length : 1566 bp Strand : - Note : identified by match to protein family HMM PF02384; match to protein family HMM PF02506; match to protein family HMM PF02809 DNA sequence : ATGGCGCGAATCAAAACTGAAAAGCCTACCAAAACCGAACCGCTGGAAAAACAACTCTGGAAAGCGGCTGATAAGCTGCG CAAAAACATTGATGCTGCGGAATATAAGCATGTGGTGCTCGGTCTTATTTTCCTTAAATACATTTCAGACTCTTTCGAAG AGCTGCATATAAAACTAAAAAAAGGCAAGGGCGACTACGTCGGCGCCGACCCGGAAGATAAAGACGAATACAAAGCTGAG AATATTTTCTTTGTACCGCGCAAAGCGCGCTGGTCATTTTTACTGGGTAAAGCCAAACAACCGGATATAGGCCTGCATGT GGATGCAGCCATGGATGCCATTGAAAAAGAAAACCCATCGCTCAAAGGTGTACTGCCTAAAGTTTACGCCCGCCAGAACC TCGACCCCACCAGTCTCGGCGGTCTGATTGATTTGGTAAGCAATATCGCCCTCGGCGATGCCAAGGCGCGCAGTGCCGAT GTGCTCGGTCATGTATTCGAATATTTTCTCGGTGAATTCGCGCTGGCCGAAGGCAAACAGGGTGGTCAATTCTATACGCC GCGCTCCATCGTGGAATTGCTGGTCGCCATGCTCGAACCCTACAAAGGCCGCGTGTTCGACCCCTGCTGCGGTTCCGGCG GTATGTTTGTGCAATCGGAAAAATTTGTGGAGGAGCACCAGGGCCGCGTCAACGATATTTCCATCTACGGGCAGGAAAGC AACCAGACCACCTGGCGTCTCGCCAAGATGAACCTTGCCATCCGCGGCATCGACGCCTCACAGGTGAAATGGAACAACGA AGGCTCATTTTTAAACGATGCCCACAAAGATGTAAAAGCCGATTACATCATTGCCAACCCACCGTTCAATGTCAGCGACT GGAGCGGCGAACTGCTGCGCACCGACGGCCGCTGGAAATACGGCCCGCCGCCCCCGCTCGGCAATGCCAACTTCGCCTGG CTGCAACATTTTATTTACCACCTGGCTCCCAAAGGTAAAGCCGGTGTGGTGCTCGCCAAAGGTGCACTGACCAGTAAGAC CAGCGGTGAAGGTGAGATTCGCAAAGCATTGATTGCCGAAGGCAACCTTATCGACTGTATCGTCAACCTGCCCGCCAAAT TATTTTTAAACACCCAGATTCCCGCCGCGCTCTGGTTTATGAATCGCGCACGCGGCTCTTCATCAAAAAGCAGCGGCCAT CCGCGCAAAAGTGAAATTTTATTTATCGACGCCCGCAACCTCGGCCACCTGATCAATCGCCGTACGCGGGAACTTTCTCA CGATGACATAAACAAAATCGCTGGTGTCTACCACAATTGGCGAACCGGTGAAGGTGAATATGAAGATGTAAAAGGATTCT GCGCCTCGGTATCTTTAGAACGTGTTGCGGAACTGGATTATGTACTCACGCCCGGCCGTTACGTCGGCCTGCCGGAGGAG GAAGACGATTTCAATTTCGCCGAGCGGTTTGCAGCGTTAAAGGCAGAGTTTGAAGCGCAATTAAAAGAAGAAGCAAAATT AAATAAAGCCATTGCCAAGAGTCTGGCGAGGATCAAACTGCCATGA Protein sequence : MARIKTEKPTKTEPLEKQLWKAADKLRKNIDAAEYKHVVLGLIFLKYISDSFEELHIKLKKGKGDYVGADPEDKDEYKAE NIFFVPRKARWSFLLGKAKQPDIGLHVDAAMDAIEKENPSLKGVLPKVYARQNLDPTSLGGLIDLVSNIALGDAKARSAD VLGHVFEYFLGEFALAEGKQGGQFYTPRSIVELLVAMLEPYKGRVFDPCCGSGGMFVQSEKFVEEHQGRVNDISIYGQES NQTTWRLAKMNLAIRGIDASQVKWNNEGSFLNDAHKDVKADYIIANPPFNVSDWSGELLRTDGRWKYGPPPPLGNANFAW LQHFIYHLAPKGKAGVVLAKGALTSKTSGEGEIRKALIAEGNLIDCIVNLPAKLFLNTQIPAALWFMNRARGSSSKSSGH PRKSEILFIDARNLGHLINRRTRELSHDDINKIAGVYHNWRTGEGEYEDVKGFCASVSLERVAELDYVLTPGRYVGLPEE EDDFNFAERFAALKAEFEAQLKEEAKLNKAIAKSLARIKLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 6e-133 | 57 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 8e-131 | 56 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-132 | 56 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 7e-111 | 46 |
