Gene Information

Name : hemC (CJA_3386)
Accession : YP_001983840.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4060702 - 4061649 bp
Length : 948 bp
Strand : -
Note : identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212

DNA sequence :
ATGTCTGTATCTCTTTCCCTGTTGCGTATCGCCACGCGCAAAAGCCTGCTCGCCCTCTGGCAGGCGGACTATGTCAAAAC
CGAACTGGAACGCCATCATCCAGGCTTGCGTGTGGAGCTGGTTCCCCTGACCAGTCGCGGCGACAAGATCCTGGATGTGC
CGCTCGCTAAGGTGGGGGGCAAGGGATTATTTGTGAAAGAGCTGGAACAGGCGCTCTTGGCCGGCGCTGCTGATATTGCT
GTCCACTCCATGAAAGATGTCCCCATGGAGTTCCCTGACGGCTTGGGCTTGGCGGTTATCTGCCCGCGTGAAGATGCGCG
CGATGCCTTTGTCTCCAATCGCTTTGCATCCCTTGATGACCTGCCGGCAGGCGCTGTCGTGGGTACTTCCAGCTTGCGCC
GCCAGTGCCAGTTGTTGGCAAGGCGTCCGGATTTGCAGGTGAAATTCCTGCGTGGCAATGTGCAAACGCGCCTGCAGAAA
CTGGATGATGGTGAGTATGATGCAATTATTCTTGCCGCTGCGGGGCTGATTCGCCTGGAGCTGCAGGCACGTATCCGCAG
TTTGATTGCCCCGGAGGTTTCACTGCCCGCCGGTGGCCAGGGCGCTGTCGGTATTGAATGCCGTATGCAGGACCAGGCCA
CGCTGGCACTGTTGCAGCCTTTGCACCACCAGCCAACAGCGGAACAGGTGCTGGCCGAGCGCGCTATGAACCGGCGCCTG
CAAGGCGGCTGCCAGGTCCCTATCGCCTGTTATGCCTTGCAGCAGGGGGGTGAGCTTTGGTTGCGCGGGTTGGTCGGTGC
GCCTGATGGTAGCCAGATGTTGTTTGATGAAATTCGCGGGCCTGTGGCTGAAGGTGAGCAGATGGGGATCCAGCTGGCCG
AGCGTTTACTGGCGGCGGGAGCGGACAGCATTTTAGCGCAGGTATATGGCGAGGCAGATGAGGAATGA

Protein sequence :
MSVSLSLLRIATRKSLLALWQADYVKTELERHHPGLRVELVPLTSRGDKILDVPLAKVGGKGLFVKELEQALLAGAADIA
VHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGAVVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQK
LDDGEYDAIILAAAGLIRLELQARIRSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRL
QGGCQVPIACYALQQGGELWLRGLVGAPDGSQMLFDEIRGPVAEGEQMGIQLAERLLAAGADSILAQVYGEADEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-73 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-73 61