Gene Information

Name : CJA_0336 (CJA_0336)
Accession : YP_001980860.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : IS66 family element, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 410842 - 412407 bp
Length : 1566 bp
Strand : -
Note : identified by match to protein family HMM PF03050

DNA sequence :
GTGTGGATGGAAAACAAACCCGATCTTCTGCAAGAAAATATTGATCTGCAAAAAATAGTTGCCGATAAAGACGATATTAT
TTCAGCGCAGGAAAAATCCCTTCAAAACAAAGAAAAACGTATTCGTATTCTTGAAGAATATATCCTCTCGCTCCAGCAAA
AACAATTTGGCAGCTCCAGTGAAAAGCAGGACGTGATCCAGTCGGAGCTGGTGTTTACCGAGGCGGAAGATACAGCGGAA
GCTGAAGTCCCTGAGCAAGCCGATGCATTTGCCGATGCCACGGTGGTGGCAGAACACAAGCGCAAGAAAAAACGTGCATC
TATTCCCAAAGAGTTACCCCGCATCGAGATTATCCATGATCTGCCCGAGGGTCAAAAATGTTGTCCGCACGATGGTGCTG
AATTAAAACCTATCGGTTTTGAATCCCATGAACAATTGGACATTATTCCCGCCAGTGTTCGGGTGTTACATCACAAGCGT
TTGAAATACGCTTGCCCGTGTTGCGAAAACTATCTTGTGACTGCAAGGAAACCTTCGCAACCCATTGAAAAAAGCATCGC
CTCACCCGGCCTTCTGGCCCATATCGCCACGCAAAAATATGTGGATGCCTTACCGCTGTATCGCCAAACGGAGATCTTCA
AACGTATTGGCGTGGAGATGGATCGTACGACACTTGCCAACTGGATGGTTCGCTGCGGCGCCATCGTACAACCATTGATT
AATCTGATCCATGAAAGAATGTTGGAGCAAGCGATTCTTCATGCAGATGAAACGCGAGTGCAAGTATTGAATGAAACGGG
GCGTGCGGCTGAAACGCAAAGCTTTATGTGGGTATTGCGCAGTACACAACCGGCTTGTGCAGCGGTGCTCTACCACTATG
ACCCCACACGCAGTGGTAAGGTGATCACGGAATTGCTGCATGATTTTGATGGCGCTCTCATGACCGACGGTTACGCGGCT
TATAACGCACCCTGTGAAAAAAATAGTATTACCCATTTAGCCTGTTGGGCGCATGCGCGGCGAAAATTTATCGAGGCACA
AAAAATCCAGAAGGCGGGAAAAACCGGCAAAGCAGATCAGGCGATTGCGTTTATCCAGCAGCTTTATGGAATAGAAAAAT
CGATAAAAGACAAAACGCCGGAAGAAAAATATCAGCTGAGGCAAACACAATCGCTGCCGATGTTACAAAAAATAAAAGCC
TGGTTAGATAAAAGTATAGCCCATGCGCTACCACAATCGTTAATTGGAAAAGCGTTGCATTATCTGCATGAGCAATGGCC
AAAATTGATTTGCTATGTGGAGTCGGGGGATTACCCGATAGATAACAATGCGGCGGAGAATGCCATTCGTCCGTTTGTGA
TTGGGCGTAAAAACTGGCTCTTCTCTGCCAGTCCCAAAGGGGCCGCAGCGAGTGCGAATTTATACAGCGTGATTGAAACG
GCCAAAGCGAATGGACTTGAGCCCTATACCTATTTGCGAAAAGTCTTTTCTGAACTTCCGCAGGCTACGAGCCTTGAGCA
AATCGAGGCATTGTTGCCATGGAATGTCAAAAGTGGTGTTGATTAG

Protein sequence :
MWMENKPDLLQENIDLQKIVADKDDIISAQEKSLQNKEKRIRILEEYILSLQQKQFGSSSEKQDVIQSELVFTEAEDTAE
AEVPEQADAFADATVVAEHKRKKKRASIPKELPRIEIIHDLPEGQKCCPHDGAELKPIGFESHEQLDIIPASVRVLHHKR
LKYACPCCENYLVTARKPSQPIEKSIASPGLLAHIATQKYVDALPLYRQTEIFKRIGVEMDRTTLANWMVRCGAIVQPLI
NLIHERMLEQAILHADETRVQVLNETGRAAETQSFMWVLRSTQPACAAVLYHYDPTRSGKVITELLHDFDGALMTDGYAA
YNAPCEKNSITHLACWAHARRKFIEAQKIQKAGKTGKADQAIAFIQQLYGIEKSIKDKTPEEKYQLRQTQSLPMLQKIKA
WLDKSIAHALPQSLIGKALHYLHEQWPKLICYVESGDYPIDNNAAENAIRPFVIGRKNWLFSASPKGAAASANLYSVIET
AKANGLEPYTYLRKVFSELPQATSLEQIEALLPWNVKSGVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71494.1 unknown Not tested Hrp PAI Protein 7e-104 50