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Name : CJA_0335 (CJA_0335) Accession : YP_001980859.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Unknown Product : IS3 family transposase, orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 409901 - 410755 bp Length : 855 bp Strand : + Note : identified by match to protein family HMM PF00665 DNA sequence : GTGAGATTTGCGTTTATTCGAGAGCATGCTTCGCGCTGCCGGGTAAAACACTTGTGTCGCATGCTAAGTGTCAGTCGCAG TCGTTATTACGAGTGGCTGGGACAGCAACAGGATAAGCCTGATCCGGAACAGCAGAGGCTTGAAACCTGCATGCGCGCAT TGTTTGTTGAATCCAACAGCAGCATGGGCAGCAGACGCATGGCGCGGCGATTACAGGCCCAAGGTTTTGCGGCGGGGCGG TATCGGGTACGACGACTGATGAAAAAGCGGGGGCTGGTAGTTAAACAGAAGCGTAAGTTTCGCATTACCACCAACAGCAA CCATAAATTGCCGGTAGCGGAGAATATACTTGATCGGCAGTTCAATCCGGTTACACCGAATCAAGCCTGGGCGGCTGACA TTACTTATATTTGGACAGTGGAAGGATGGCTGTACCTGGCGGTGGTGATTGACCTGTATTCGCGGCGGGTTGTTGGCTGG TGCATGGATAAACGGCAAACGAAATCGCTGGTGATCCGTGCATTGATGATGGCGGTGAATATGCGCAAGCCATCGGCGGG ACTCATCCACCACTCGGATCGTGGTTCGCAATATGCGAGCCTGAAGTATCAGGCTTCATTGAAGCAACACGGTATTGTGT GTTCCATGAGCCGCAAGGGAAATTGTTGGGACAATGCTGTTGTGGAGCGCTTCTTTAGCAGCCTGAAACGGGAGTGGATC AGGGATAATTTATATCGCTATCGAGAAGATGCGATTCGGGATGTGCGAGCTTATATTGTGACCTGGTATAACTCGCGAAG ACCACATTCAACTCTGGGCTACAAAAGCCCGATTGAATTTGAAAAGTGTGCTTAA Protein sequence : MRFAFIREHASRCRVKHLCRMLSVSRSRYYEWLGQQQDKPDPEQQRLETCMRALFVESNSSMGSRRMARRLQAQGFAAGR YRVRRLMKKRGLVVKQKRKFRITTNSNHKLPVAENILDRQFNPVTPNQAWAADITYIWTVEGWLYLAVVIDLYSRRVVGW CMDKRQTKSLVIRALMMAVNMRKPSAGLIHHSDRGSQYASLKYQASLKQHGIVCSMSRKGNCWDNAVVERFFSSLKREWI RDNLYRYREDAIRDVRAYIVTWYNSRRPHSTLGYKSPIEFEKCA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 3e-53 | 47 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 5e-53 | 47 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 3e-53 | 47 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 7e-53 | 47 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 5e-53 | 46 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-53 | 46 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 5e-53 | 46 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 5e-53 | 46 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 2e-46 | 45 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 1e-46 | 45 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 4e-52 | 45 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 9e-36 | 45 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 9e-36 | 45 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 8e-43 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 3e-42 | 44 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 8e-43 | 44 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 2e-48 | 44 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-48 | 44 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-48 | 44 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-36 | 44 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-36 | 44 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 2e-37 | 43 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 2e-37 | 43 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 2e-39 | 43 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 8e-43 | 42 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 2e-44 | 42 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 2e-44 | 42 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 2e-44 | 42 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 2e-44 | 42 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 2e-44 | 42 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 2e-44 | 42 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 2e-44 | 42 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 2e-44 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CJA_0335 | YP_001980859.1 | IS3 family transposase, orfB | VFG1706 | Protein | 3e-53 | 47 |
| CJA_0335 | YP_001980859.1 | IS3 family transposase, orfB | VFG1484 | Protein | 5e-36 | 45 |
| CJA_0335 | YP_001980859.1 | IS3 family transposase, orfB | VFG0785 | Protein | 7e-37 | 44 |
| CJA_0335 | YP_001980859.1 | IS3 family transposase, orfB | VFG1631 | Protein | 4e-43 | 42 |
| CJA_0335 | YP_001980859.1 | IS3 family transposase, orfB | VFG1122 | Protein | 1e-44 | 42 |
