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Name : gspE (CJA_3331) Accession : YP_001983785.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3987483 - 3989057 bp Length : 1575 bp Strand : - Note : identified by match to protein family HMM PF00437 DNA sequence : GTGACCGAGCATGCCTTGAGCGATTCACCGGTTGTTCTGGTCGCCGAACCAGGCCTGCCGGTGGTTGTGGATTCTGATGT TGTTGATGAGGCCGCTGTGCCTGTCTACGAGCGCCTGCCTTTCAGTTTTGCCTCAACCCATGGGGTGATGCTGGATACGC TGGAGTCCGGGCAAAAGCCGCGCGTGCTGTTTCGCGCCGGATTAACGCTGGATGTATTCCTCGAATTGCAACGGGTATTG GGCGCGGATTTTGAGCTGGAAGAGCTGCCCTCGGAAGATTTCCAGAAGCGCCTGACACGGGAGTACCAGAGCGGTGACGG CGCCGCGCAACGCGCCGCAGAAGACCTGGGCAATGAGTTTGACCTGTCTTCCATGGCCGATGATTTGGCGGATCGAACCG ACCTGCTTGCCGGTGATGATGATGCGCCGATTATCCGTCTGATTAACGCCATTTTGTCCCAGGCAGTGCGCGAGGGGGCG TCGGATATTCACCTGGAACCTTTTGAAGATCGGGTATCGGTGCGTTTCCGTATCGATGGCGTACTGACCGAGGTGCTTTC GCCCAAACCCGAACTGGCGCCGGTACTGGTATCGCGTTTGAAGGTAATGGCGCGCCTGGATATCGCTGAAAAACGCCTGC CCCAGGATGGCCGTATTACGGTTCGCCTCGCTGGCCATGCGGTGGATATTCGCGTATCTACCATTCCCTCGGCGTTTGGT GAGCGTATCGTACTGCGTCTGCTCGATCAGGCCGCCGGCCAGCTGAAACTTGAACAGCTGAATATGCCGCGCCATGTGAT GGAGCGCTTCGCCAAAAACCTGCTGAAACCTCACGGCATTATCTTGGTGACCGGTCCTACCGGTTCCGGTAAAACCACCA CCCTCTATGCCGGCCTCAGTCATATCAACACCCGCAGTCGCAATATCCTCACCATCGAAGACCCGGTGGAATATCTGTTG CCCGGTATCGGTCAAACCCAGGTTAACACCAAGGTCGATATGACCTTTGCACGCGGTTTGCGCGCCATCCTGCGCCAGGA CCCGGATGTGGTGATGGTGGGTGAGATCCGTGACGGTGAAACGGCGGAAATCGCTATCCAGGCATCGTTGACCGGTCACC TGGTGTTATCAACATTGCACACCAATACCGCCATCGGTGCAGTGCTGCGTTTGAAAGACATGGGGGTTGAGCCCTTCCTG CTGGCATCGAGTTTGGAAGTGGTCATGGCGCAGCGCCTGGTGCGTTTGCTGTGCAGCCACTGTAAGGAACAATACGTCCC CAGCGACGCCGAGCGCGATATGCTCAAGTTGCCGGCAAATACCTCGATTTATCGCCCGGCGGCCTCCGGTTGCAAACATT GCAACCATCAGGGCTATCGCGGTCGTAAGGGTATCTACGAATTAATTGAAATCAATGAGCGCCTGCGCCACCTGATCCAC GAGCAGGCGGGCGAGCAAGAGCTGCTCACGGAGGCGCGCAAACACAGTCCATCGATCAGCGACGATGGGCGCCAGTGTGT GCTTGACGGTATTACCAGCATTGAAGAAGTGCTGCGTGTAACCACCCAGCTGTAA Protein sequence : MTEHALSDSPVVLVAEPGLPVVVDSDVVDEAAVPVYERLPFSFASTHGVMLDTLESGQKPRVLFRAGLTLDVFLELQRVL GADFELEELPSEDFQKRLTREYQSGDGAAQRAAEDLGNEFDLSSMADDLADRTDLLAGDDDAPIIRLINAILSQAVREGA SDIHLEPFEDRVSVRFRIDGVLTEVLSPKPELAPVLVSRLKVMARLDIAEKRLPQDGRITVRLAGHAVDIRVSTIPSAFG ERIVLRLLDQAAGQLKLEQLNMPRHVMERFAKNLLKPHGIILVTGPTGSGKTTTLYAGLSHINTRSRNILTIEDPVEYLL PGIGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDGETAEIAIQASLTGHLVLSTLHTNTAIGAVLRLKDMGVEPFL LASSLEVVMAQRLVRLLCSHCKEQYVPSDAERDMLKLPANTSIYRPAASGCKHCNHQGYRGRKGIYELIEINERLRHLIH EQAGEQELLTEARKHSPSISDDGRQCVLDGITSIEEVLRVTTQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-124 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-125 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001983785.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-133 | 60 |
| gspE | YP_001983785.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-124 | 57 |
| gspE | YP_001983785.1 | general secretion pathway protein E | VFG1876 | Protein | 7e-121 | 55 |
| gspE | YP_001983785.1 | general secretion pathway protein E | VFG2426 | Protein | 7e-69 | 49 |
| gspE | YP_001983785.1 | general secretion pathway protein E | VFG0233 | Protein | 1e-79 | 48 |
