Gene Information

Name : gspG (CJA_3329)
Accession : YP_001983783.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3985740 - 3986195 bp
Length : 456 bp
Strand : -
Note : identified by match to protein family HMM TIGR01710

DNA sequence :
ATGAATAACATTCGTGCAATGAAACATCGCGTCCAGCGCGGTTTTACCCTGATCGAAATCATGGTGGTGGTGATCATCAT
CGGTTTGCTCGCCGGTATTGTCGTGCCCAACGTCATGGAAAGCCTGGACAAGGCTAACGTGCAAAAAGCCCGTGCCGACT
TTAAAGCTCTGCAGACGGCACTCAAGCTGTACCGCATCGATAATTTTAACTACCCGACAACCGAACAGGGCCTTGAGTCG
CTGGTGACCAAGCCTACGATTGCGCCCTTGCCGCGCAACTACAAGGCAAATGGTTACCTGGAAACCCTGCCCAAAGATCC
ATGGGGCAATGATTACCAATATATGAGCCCGGGTCAGGGACATGAATATGACATCTACAGCCTTGGCGCCGATGGTGTAA
ATGGCGGCGATGGCCAGAATGCCGATCTTTCTGTGTGGGATGATGGCACTCAGTAA

Protein sequence :
MNNIRAMKHRVQRGFTLIEIMVVVIIIGLLAGIVVPNVMESLDKANVQKARADFKALQTALKLYRIDNFNYPTTEQGLES
LVTKPTIAPLPRNYKANGYLETLPKDPWGNDYQYMSPGQGHEYDIYSLGADGVNGGDGQNADLSVWDDGTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-26 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-26 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_001983783.1 general secretion pathway protein G VFG0180 Protein 3e-30 56
gspG YP_001983783.1 general secretion pathway protein G VFG1871 Protein 4e-23 55
gspG YP_001983783.1 general secretion pathway protein G VFG2050 Protein 4e-27 53