Gene Information

Name : lspA (CJA_3216)
Accession : YP_001983670.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : signal peptidase II
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 3839759 - 3840271 bp
Length : 513 bp
Strand : -
Note : identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077

DNA sequence :
ATGACAAAAAAGGTTTATCACCAATACTGGTTTTGGTATTTGGCAGCGTTCGTTGTATTCCTGCTGGATCAGGGCAGCAA
GCATTGGATTGAGGCTGCATTCGACTATAACGAGACGAAAGTATTTACCTCGTTCTTTAACTTCACCCTGCGCTACAACC
CGGGGGCTGCTTTCTCGTTTCTGGCGGATGCCGGTGGCTGGCAGCGCTGGTTCTTTACCATCGTGGCTGTGGCGGCCAGT
GTGTTGCTTATCGTCTGGATTTGTCGCGTGGCATCGTCCAAGCCGCGGGAAGCCTTTGCGTTGTCGTTTATCCTCGGTGG
CGCCGTGGGCAACCTGTATGATCGGATTATCCATGGCCATGTCGTCGATTTTATTGTGGTGCATTATCAGGATTATTACT
GGCCTGCGTTTAACCTTGCCGACGCTGCAATCTCCCTGGGAGCCATGGTGCTGATTGCCGATTTGTTTATTAATCCTGAC
AAGACTTCTGGTGAGAAACCAACCAATGCGTGA

Protein sequence :
MTKKVYHQYWFWYLAAFVVFLLDQGSKHWIEAAFDYNETKVFTSFFNFTLRYNPGAAFSFLADAGGWQRWFFTIVAVAAS
VLLIVWICRVASSKPREAFALSFILGGAVGNLYDRIIHGHVVDFIVVHYQDYYWPAFNLADAAISLGAMVLIADLFINPD
KTSGEKPTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-11 50
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-11 50
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-10 50
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 6e-22 44
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 9e-13 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 6e-13 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 6e-13 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 6e-13 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 9e-13 42