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Name : pilR (CJA_3209) Accession : YP_001983663.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Virulence Product : PilR Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3828504 - 3829907 bp Length : 1404 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199 DNA sequence : ATGACCATGAAACGCGCCCTGATTATTGATGATGAGCCCGATATCCGTGAGCTCCTCGAAATCACGTTGGGTAGAATGCA AATTACAACCGATGCAGCTGCCAATATTGCACAAGCAAAAAGCCATCTTAATTGCAATCACTATGATCTATGCCTGACTG ATATGCGCCTACCTGATGGCAGCGGGCTTGAGCTGGTTGAATATATACAACAACAACACCCGGGGTTACCCGTTGCGGTA ATTACCGCACATGGCAGCATAGACACCGCGATTGAGTCAATGAAAGCTGGTGCCTTTGATTTCATCTCAAAACCTGTTGA CCTGGCAACATTACGCCGCCTGGTCAACACGGCTATTGAGTCAGCCCAACTACCCCCGCAGGAACCGCCTCAAACAACAC CGATTATCGGCCATTCAAAAGCAATCCAGGATCTTATCCGCAGTATTCAAAAACTGGCTCGCTCACAAGCCCCAGTGTAC ATCAGCGGAGAATCCGGCTCCGGAAAGGAGTTGGTAGCACGCTCCATACATGACCTGGGCCCCAGATCCAGTAAACCATT TATTGCGGTTAACTGTGGGGCAATTCCACGTGAACTAATGGAGAGTGAATTTTTTGGTCATAAAAAAGGAAGCTTCACCG GTGCACACCAGGACAAAACGGGATTATTTCAAGCCGCTGAAGGAGGGACTTTATTTTTTGATGAAGTTGCCGACCTTCCT ATCGATATGCAAGTCAAACTCTTGCGTGCCATCCAGGAAAAATCTGTCCGCCCCATAGGGGCGGCAGAAGAAATAACCAC CGATGTACGTATACTCTGTGCAACACATAAAAACCTGGAGAAGGAAGTTGCCGAAGGCCGCTTTCGCCAAGATTTATTTT ATCGACTCAATGTGATTCAACTTGCCGTTGCGCCATTACGCGATAGAAAAGAAGACATTCCTCTTCTTACCCAACACTTG TTACAAAAACTGGCAACGGAAATAGGTTTACCAACACCGCATTTATCACCCGCCGCACAAAAACGACTGGAAGAGTATCA TTTTCCCGGCAACGTTCGCGAACTGGAAAACGTCCTGGAAAGGGCATTTACACTGTGTGACAGCGATACGATAGAAGCAG AAGATTTACAACTCAGAGGCAGCACAAATAGCATTAGACCTGTGATTGAAGCAGGGCAATTGCCAGGCAGCCAAACACCT GCTCGCAACAATACTGTCGACTACCCTGCACGTTGCGCAGAATATCCATCGCTGGACGAATATCTTCAGGATGTAGAAAA AGAAATACTATGCTCTGCACTTGAGCAGGCCAGGTGGAACAAAACCCTGGCCGCCAAGCATTTGGGAATCAGCTTTCGCT CATTGCGATATCGCTTGCAAAAGCTGGGATTGGAGGATGAATGA Protein sequence : MTMKRALIIDDEPDIRELLEITLGRMQITTDAAANIAQAKSHLNCNHYDLCLTDMRLPDGSGLELVEYIQQQHPGLPVAV ITAHGSIDTAIESMKAGAFDFISKPVDLATLRRLVNTAIESAQLPPQEPPQTTPIIGHSKAIQDLIRSIQKLARSQAPVY ISGESGSGKELVARSIHDLGPRSSKPFIAVNCGAIPRELMESEFFGHKKGSFTGAHQDKTGLFQAAEGGTLFFDEVADLP IDMQVKLLRAIQEKSVRPIGAAEEITTDVRILCATHKNLEKEVAEGRFRQDLFYRLNVIQLAVAPLRDRKEDIPLLTQHL LQKLATEIGLPTPHLSPAAQKRLEEYHFPGNVRELENVLERAFTLCDSDTIEAEDLQLRGSTNSIRPVIEAGQLPGSQTP ARNNTVDYPARCAEYPSLDEYLQDVEKEILCSALEQARWNKTLAAKHLGISFRSLRYRLQKLGLEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 1e-107 | 50 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 1e-107 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilR | YP_001983663.1 | PilR | BAC0467 | Protein | 7e-70 | 41 |
| pilR | YP_001983663.1 | PilR | BAC0089 | Protein | 7e-72 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilR | YP_001983663.1 | PilR | VFG1214 | Protein | 1e-139 | 60 |
