Gene Information

Name : CJA_0029 (CJA_0029)
Accession : YP_001980553.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 54270 - 55001 bp
Length : 732 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGATCAAATTGCACAATATCCACAAGTACTATCACTCCGGTGAACAGCCACTGCATGTGCTTAAGGGAATAGACCTCCA
TATTCGCCAAGGGGAGTTGGTGTCTATTATGGGCTCTTCCGGCTCGGGTAAATCTACCCTGCTGAATATCCTCGGTATCC
TCGACACCCATGACCAGGGTGATTATTTCCTCAACGGAGTGGAAATCAAAAACCTCAAGGAAAAAAAAGCAGCGCAGTTG
CGCAATCAGCTTTTGGGTTTTGTGTTCCAGTCGTTTAATTTATTGCCTTTTAAAAATGCAACTGAAAATGTCGCCCTGCC
TTTGTATTACCAGGGTGTGGGACGCAAAGAGCGCAACTACCGTGCCGAAAAATATCTGGACATGGTCGGTTTATCCCATC
GCGCCACTCATATGCCTAATGAACTGTCCGGTGGACAAAAGCAGCGGGTTGCCATTGCCCGCGCCCTGGTGACACAACCC
AAGGTCATTCTTGCCGACGAGCCCACAGGTGCCCTGGATAGCCAGACTACCCAGGAAATCATGGCGCTCATGAAAGAAGT
ACACTCGCTGGGTAATACCATTGTGATAGTGACCCACGAACAGGACATCGCCGATCAAACCCAGCGCCAGATTGTCTTAA
AAGATGGTTTGATTGTGCCGGCAAAAGAGATCCACGGCAGCCATGCTGAATCGCTGGATAACAATGATCGCGAAGAAGAG
ATCCTCGGATAA

Protein sequence :
MIKLHNIHKYYHSGEQPLHVLKGIDLHIRQGELVSIMGSSGSGKSTLLNILGILDTHDQGDYFLNGVEIKNLKEKKAAQL
RNQLLGFVFQSFNLLPFKNATENVALPLYYQGVGRKERNYRAEKYLDMVGLSHRATHMPNELSGGQKQRVAIARALVTQP
KVILADEPTGALDSQTTQEIMALMKEVHSLGNTIVIVTHEQDIADQTQRQIVLKDGLIVPAKEIHGSHAESLDNNDREEE
ILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJA_0029 YP_001980553.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-57 56
CJA_0029 YP_001980553.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-44 47
CJA_0029 YP_001980553.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-40 44
CJA_0029 YP_001980553.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-36 42