Gene Information

Name : xylA (CJA_3061)
Accession : YP_001983515.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 3633292 - 3634623 bp
Length : 1332 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCATTGTTCTCGGTAGCAAAGAATATTTCCCCGGCATCGGCAAAATCGGTTACGAAGGTGCGGATTCTGACAATCC
CCTGGCGTTCAAATATTACGATGAAAATCGTGTTGTTGCCGGCAAAACCATGAAAGAGCATTTCAAATTTGCGGTTTGTT
ACTGGCACACTTTCTGTGGTGCCGGTCACGACCCTTTTGGTCCAGGCACCAAAATATTTCCCTGGGCCGCTACGCCGGAT
GCTGTTGCTCGCGCCCGTGAAAAAATGGATGCGGCCTTTGAATTTATCACCAAGCTGGGTGTTCCCTACTACTGCTTCCA
CGATGTTGACCTGATCGACGAAGGCAGCAGCCGCGCCGAAACTTCCAAGCGTTTGCAGACCATCGTTGAATACGCAAAGG
AAAAACAAAAAGCGTCTGGTATTAAACTGCTGTGGGGTACTGCCAACCTGTTCTCCAACCCGCGCTACATGAACGGTGCA
TCGACCAACCCGGATTTCAGTGTGCTGGCTTACGCCGGTGCGCAATTGAAAGACGCGCTCGATGCAACCATTGCTCTGGG
CGGTGAAAACTATGTGTTCTGGGGCGGTCGCGAAGGTTACATGAGCCTGCTCAACACTGACATGAAGCGCGAGCAGGAGC
ACATGGCCCGCTTCCTGACCATGGCGCGTGACTATGCGCGTGCCCAGGGCTTTAAGGGAACGTTCTTCATCGAGCCCAAG
CCGATGGAACCCTCCAAGCACCAATACGATTTTGACGCGGCCACGGTTATCGGCTTCCTGCGTCATCACGGCCTGGATAA
AGATTTCAAACTGAACCTGGAAACCAACCACGCCACCCTGGCTGGTCACACCATGGATCACGATATGCAAGTGGCGGCTG
ATGCCGGCATGTTGGGCTCTATCGACGCTAACCGTGGCGACTACCAAAATGCCTGGGACACCGACCAGTTCCCGATGAAT
ATCAACGAAACCGTTGAGATGATGCTGGTATTGCTGCGCAGTGGTGGCTTGCACGGTGGCGGTGTGAACTTTGATGCGAA
AGCGCGTCGCAATTCACCCGATCCGGTAGACCTGTTCTACGGTCATATCGGTGGCATGGATACCTTTGCCCGTGCGCTGT
TGATTGCCGATGACCTGCTGCAAAAATCGCCGCTGGAAGCCATGCGTAAAGAGCGTTATGCCAGTTTTGATGCCGGTGAT
GGCTCACTCTATGAGCAAGGCAAGCTGACCCTGGAGCAATTGGCCAATATCGGTAACAGCAATGGTGAAGTGGCTCTGAC
CAGTGGCCGTCAGGAACTCTACGAAAACATCATTAACCGTTACATCCGTTAA

Protein sequence :
MSIVLGSKEYFPGIGKIGYEGADSDNPLAFKYYDENRVVAGKTMKEHFKFAVCYWHTFCGAGHDPFGPGTKIFPWAATPD
AVARAREKMDAAFEFITKLGVPYYCFHDVDLIDEGSSRAETSKRLQTIVEYAKEKQKASGIKLLWGTANLFSNPRYMNGA
STNPDFSVLAYAGAQLKDALDATIALGGENYVFWGGREGYMSLLNTDMKREQEHMARFLTMARDYARAQGFKGTFFIEPK
PMEPSKHQYDFDAATVIGFLRHHGLDKDFKLNLETNHATLAGHTMDHDMQVAADAGMLGSIDANRGDYQNAWDTDQFPMN
INETVEMMLVLLRSGGLHGGGVNFDAKARRNSPDPVDLFYGHIGGMDTFARALLIADDLLQKSPLEAMRKERYASFDAGD
GSLYEQGKLTLEQLANIGNSNGEVALTSGRQELYENIINRYIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-98 51
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 9e-99 51