Gene Information

Name : CJA_2443 (CJA_2443)
Accession : YP_001982904.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2788784 - 2789281 bp
Length : 498 bp
Strand : +
Note : identified by match to protein family HMM PF00578

DNA sequence : 
ATGGCAACAGTAACCCTCAAAGGAAATCCCTTTAACACCAGCGGTGAGCTGCCCGCCACCGGCAGCAAAGCCCCTGCATT
TAAACTGGTAAAAACCGACCTGTCAGAAGTCAGCAGCACCGACCTGGCCGGCAAGCGCGTCGTACTCAACATTTTCCCCA
GTGTTGATACCCCAACCTGTGCAACCTCCGTGCGTACTTTCAACGCCGAAGCCAGCAAGCTGGATAACACCGTTGTAGTT
TGTGCCTCCCAGGATCTGCCTTTTGCCTTGAGCCGCTTCTGCGGCGCCGAAGGCTTGAACAATGTGGTGCCCGCCTCTGC
TTTCCGCTCTGACTTTGCCAGTGCTTATGGCGTAAAACTGGTAGACGGCCCCCTGGCTGGCCTGACCGCCCGCGCCGTGG
TGGTATTGGATACCGATGGCACTGTGCTTCACGCTGAACTGGTGAGCGAAGTGGCCCACGAGCCTAACTACGACGCCGCA
CTCAAAGCCCTGGCGTAA

Protein sequence : 
MATVTLKGNPFNTSGELPATGSKAPAFKLVKTDLSEVSSTDLAGKRVVLNIFPSVDTPTCATSVRTFNAEASKLDNTVVV
CASQDLPFALSRFCGAEGLNNVVPASAFRSDFASAYGVKLVDGPLAGLTARAVVVLDTDGTVLHAELVSEVAHEPNYDAA
LKALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 5e-35 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-35 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-34 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-35 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJA_2443 YP_001982904.1 thiol peroxidase VFG0087 Protein 1e-35 46