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Name : mshE (CJA_2394) Accession : YP_001982855.1 Strain : Cellvibrio japonicus Ueda107 Genome accession: NC_010995 Putative virulence/resistance : Virulence Product : MSHA biogenesis protein MshE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2736036 - 2737751 bp Length : 1716 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157 DNA sequence : ATGAACACAACGCTTCAAAAACGCATTCGCATTGGTGATTTACTGGTCGAAAAACAAATGATCAGCGAGAGCCAGTTGCA ACATGCCTTGCAAGAGCAAAAGCTGACCGGGCGTAAACTGGGGGCCACGCTGGTCGAGTTGGGTTATGTCGATGAAAACG CACTGCTCAACCTGCTGTCGGCGCAATTGAATATTCCCTTCGTCGAGTTAAAGCAATTTCGTTTTGATCGCGAACTGGTA CAACGCCTGCCTGAAACCAGTGCACGCCGCTACCGGGTGATTCTGCTGCGCGAGGATTTTGACGGCCTGTTGCTGGGCAT GGCTGACCCAACGGATATTTTTTGCCTGGACGAATTACAGCGTGTACTGCAGAAAAACCTTAAGCCGGCGGTCGTGCGGG AATCCGAACTGCTGGATGTTCTGGATATCGCCTATACCCGCGCCAGCGAAATTGCCAGCCTGGCGACAGAGCTGGATGAG GAACTGCAGGAATCCGCCGTAGACCTGGCAGATTTCATTAGCGATGCCACTGACAGTGAAGCCCCCGTGGTCAAGTTGCT GCAAAAGATTTTCGAGGAAGCCATTGCAGCAAAATCATCGGATATCCATATAGAGCCGGATGAAAAAGTATTGCGTATCC GCAATCGTATCGATGGTGTATTACTGGAACAGGTGATGAATGAAAAGCGTATCGCATCGGCGCTCGTTGTTCGTTTGAAA TTGATGGCCGGCCTGGATATTTCGGAAAAACGACTGCCCCAGGATGGGCGCTTTAACCTCAAAGTCAAACAGCGCAATAT CGATGTGCGTATTTCCACCATGCCCGTACAATTTGGTGAGTCCGTTGTGATGCGGTTACTGGATCATACCGATGGTGTGT TGGCCCTGGATAAGGTGGGTATGCCGCCCAACCTGATCAGCCGCTTTCGCAAGGTGATTACGCGCCCCCATGGATTGGTA CTGGTTACCGGGCCTACAGGTAGTGGTAAAACCACCACCCTCTATGGGGCTTTGTCAGAACTGAATAGCCCTGAGAAAAA AATCATTACCGTTGAAGACCCAGTGGAATATCGCCTGCCTCGTATCAGTCAGGTGCAGCTGCATGAAAAAATCGGTCTGA CCTTCGCCAGTGTATTGCGCGCGACCCTGCGCCAGGATCCGGATATTTTGCTGGTGGGGGAAATCCGCGATGCCGAGTCG GCAGAAATTGCCCTGCGCGCGTCAATGACCGGCCATATGGTGTTGTCAACCTTGCATACCAATGACGCCGTCAGTTCCGC CATGCGCCTGATGGATATAGGTGTGGACGGTTATCTGGTGGCTGCGGCGCTTAAAGCGATTATCGCGCAGCGACTGGTGC GGCGTATTTGCAATAGCTGTATCCAGCCGCACACCCCCGATGTTCAGGAACAGGCGTTATTGTTAGCGATAGGCAAGGGA CGCGACTTTAGTGAGGTGAGTTTCAAGCGGGGTGCAGGTTGCCCGCATTGCCACAACACGGGTTATCGCGGTCGCCTGGG TGTGTTTGAGATGCTGGAGCTGACCCAGCCGATGGCGGAGGCATTGCGGGTGAACGATATGAATGCCTTTACACAGGCAG CTTATAACAGCCCTCATTTTACAACCCTGAGTGAGTCAGCGTTGGACTATGCTGCAAAGGGAGTCACAACCCTTGAGGAA GTCATGGCCATTTCGGCACAGATTGATGAACTTTGA Protein sequence : MNTTLQKRIRIGDLLVEKQMISESQLQHALQEQKLTGRKLGATLVELGYVDENALLNLLSAQLNIPFVELKQFRFDRELV QRLPETSARRYRVILLREDFDGLLLGMADPTDIFCLDELQRVLQKNLKPAVVRESELLDVLDIAYTRASEIASLATELDE ELQESAVDLADFISDATDSEAPVVKLLQKIFEEAIAAKSSDIHIEPDEKVLRIRNRIDGVLLEQVMNEKRIASALVVRLK LMAGLDISEKRLPQDGRFNLKVKQRNIDVRISTMPVQFGESVVMRLLDHTDGVLALDKVGMPPNLISRFRKVITRPHGLV LVTGPTGSGKTTTLYGALSELNSPEKKIITVEDPVEYRLPRISQVQLHEKIGLTFASVLRATLRQDPDILLVGEIRDAES AEIALRASMTGHMVLSTLHTNDAVSSAMRLMDIGVDGYLVAAALKAIIAQRLVRRICNSCIQPHTPDVQEQALLLAIGKG RDFSEVSFKRGAGCPHCHNTGYRGRLGVFEMLELTQPMAEALRVNDMNAFTQAAYNSPHFTTLSESALDYAAKGVTTLEE VMAISAQIDEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-88 | 41 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mshE | YP_001982855.1 | MSHA biogenesis protein MshE | VFG1876 | Protein | 3e-86 | 43 |
| mshE | YP_001982855.1 | MSHA biogenesis protein MshE | VFG2048 | Protein | 1e-89 | 42 |
| mshE | YP_001982855.1 | MSHA biogenesis protein MshE | VFG0182 | Protein | 1e-82 | 42 |
