Gene Information

Name : cadR (CJA_1838)
Accession : YP_001982313.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2101011 - 2101403 bp
Length : 393 bp
Strand : -
Note : identified by match to protein family HMM PF00376; match to protein family HMM TIGR02047

DNA sequence : 
ATGAAAATTGGTGCCTTGGCAAAACAAACGGGTCTATCTGTACAGACAATCCGGTTCTACGAACAGGCGGGATTGGTGTC
CGTTCCAGAGCGAACTGAGGGTAATTACCGCCTTTACGACACCGAATCATCACGGCAATTGGGGTTTATCAAACAATGCC
GAAACCTTGGTCTTACCCTGCATGAAATACGTGAGTTAATTAAATATCAGGCAACACCGGAAGAGGCCTGTGGCGAGATC
AATCAGATTGTTGATGCACATGTGCTGGAGGTTGATGCGCGTATCGCGGAATTAACCACATTGCGTGAACAATTAATCAG
TCTGCGGACACAGTGTAATAGCTCTCGATCCGTTAAAGACTGTGGAATTCTGAAAGCCCTGACGGAGACTTGA

Protein sequence : 
MKIGALAKQTGLSVQTIRFYEQAGLVSVPERTEGNYRLYDTESSRQLGFIKQCRNLGLTLHEIRELIKYQATPEEACGEI
NQIVDAHVLEVDARIAELTTLREQLISLRTQCNSSRSVKDCGILKALTET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-30 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-31 45
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-31 45
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-31 45
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-30 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-30 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-30 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_001982313.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 6e-30 46
cadR YP_001982313.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 2e-24 43