Gene Information

Name : CJA_1313 (CJA_1313)
Accession : YP_001981804.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : IS66 family element, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1529294 - 1530877 bp
Length : 1584 bp
Strand : +
Note : identified by match to protein family HMM PF03050

DNA sequence :
ATGAAAAATATTTCTGACCTTGTGCAAGAAAATATCGAACTGCAAAAAATAGTTGCGAATAAAGACGACATTATTTCATT
GCATGAGAGATCCCTTCAAGAAAAAGAACAATCCCTTCACGCCAAAGAAAAGCGCATTCGCCTCCTTGAGGAATACATCC
TCTCGCTTCAGCAAAAACAATTTGGCAGTTCCAGTGAAAAGCAGGAAGTGCTTCAAGCGGAGCTGGTCTTTACCGAAGCG
GAGGATACCGCGGAAGCCGAAGCCCCTGAACAAGTGGATGCCTTTGCCGATGACACGGTTGTTGTAGCGGAGCATAAACG
CAAGAAGAAACGTGCATCCATTCCCAAAGAGCTACATCGTATCGAGATTACCCACGATCTGCCTGAGGATCAAAAATGCT
GTCCGCACGATGGATCGTTATTAAAACCCATCGGTTTTGAATCCCACGAACAATTAGACATTATCCCCGCCAGTGTTCGG
GTGTTACATCACAAACGATTGAAATACGCCTGCCCCTGTTGCGAAAACTATCTTGTGACCGCAAAGAAACCCGCACAACC
GATTGAAAAAAGTATCGCCTCACCCGGGCTGTTGGCCCATATTGCCACGCAAAAATATGTAGATGCCATGCCGCTGTATC
GCCAGACGGACATTTTCAAACGTATTGGTGTGGAGATGGATCGCACTACACTCGCCAACTGGATGATCCGTTGTGGAAAC
CTGGTGCAGCCATTAATTAACTTGCTGCACGAAAGAATGTTGGAACAAACGATTCTTCATGCGGATGAAACGCGTGTGCA
GGTGTTGAATGAAACCGGTCGTGCGGCTGAAACACAGAGTTTTATGTGGGTATTGCGCAGTACGCAACCCACGTGTGCAG
CAGTGCTTTATCGCTACGAACCGACACGCAGTGGAAAAGTAATCACGGAATTGCTACGTGATTTTAATGGCGCACTCATG
ACCGATGGCTATGCAGCTTACAACGCACCTTGTGAAAAAAAGGGTATTACCCATTTAGCCTGTTGGGCACATGCGCGTCG
CAAGTTTATCGAGGCACAAAAAATCCAGGCGAAGGGAAAAACCGGTAAAGCAGATCAAGCGATTGCGTTTATCCAGCAGC
TCTATGGAATAGAAAAGGCGATTAAGGACAAAACGCCGGAAGAAAAATATCAACTGAGACAAACACAATCGCTGCCGGTG
TTACAAAAAATAAAAGTCTGGTTGGATAAAGGCTTGGCACATTCACCGCCACAATCGTTGATTGGAAAGGCATTGCATTA
TTTGCATGAACAATGGCCGAAGCTGGTTCGCTATGTGGAATCGGGGGATTATCCGATTGATAACAATGCAGCGGAGAATG
CAATCCGCCCGTTTGTGATTGGGCGAAAAAACTGGCTATTCTCCACAAGTCCCAAAGGGGCCACGGCGAGTGCAAATTTA
TACAGTGTGATTGAAACCGCCAAGGCCAATGGGCTGGAGCCTTATGGGTATTTAAAAACAATCTTCACTGAATTACCCAA
TGCGACAAGCCTCGAACAGATCGAGGCATTATTACCGTGGAATTACAAGGATGGGGTTAGTTAG

Protein sequence :
MKNISDLVQENIELQKIVANKDDIISLHERSLQEKEQSLHAKEKRIRLLEEYILSLQQKQFGSSSEKQEVLQAELVFTEA
EDTAEAEAPEQVDAFADDTVVVAEHKRKKKRASIPKELHRIEITHDLPEDQKCCPHDGSLLKPIGFESHEQLDIIPASVR
VLHHKRLKYACPCCENYLVTAKKPAQPIEKSIASPGLLAHIATQKYVDAMPLYRQTDIFKRIGVEMDRTTLANWMIRCGN
LVQPLINLLHERMLEQTILHADETRVQVLNETGRAAETQSFMWVLRSTQPTCAAVLYRYEPTRSGKVITELLRDFNGALM
TDGYAAYNAPCEKKGITHLACWAHARRKFIEAQKIQAKGKTGKADQAIAFIQQLYGIEKAIKDKTPEEKYQLRQTQSLPV
LQKIKVWLDKGLAHSPPQSLIGKALHYLHEQWPKLVRYVESGDYPIDNNAAENAIRPFVIGRKNWLFSTSPKGATASANL
YSVIETAKANGLEPYGYLKTIFTELPNATSLEQIEALLPWNYKDGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71494.1 unknown Not tested Hrp PAI Protein 3e-101 51