Gene Information

Name : CJA_1312 (CJA_1312)
Accession : YP_001981803.1
Strain : Cellvibrio japonicus Ueda107
Genome accession: NC_010995
Putative virulence/resistance : Unknown
Product : IS66 family element, Orf2 protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1528905 - 1529255 bp
Length : 351 bp
Strand : +
Note : identified by match to protein family HMM PF05717

DNA sequence : 
ATGATCCAGTGGGATGATGTGCCGGTATACGTACACCGGCAACCGGTGGATTTTCGCAAATCCATTAATGGGTTGAGTGT
CTTGGTGCAGGAGTCCATGGCACTGGAGGTATTTTCCCGATCCGTGTTTGTGTTTGGCAATCGCACCCGCAATAAAATAA
AAATCCTCTACTGGGATAAAACCGGGTTTTGTCTGTGGTACAAGCGGCTGGAAAAAGACAAATTCAAATGGCCACGCCGG
GGCGATGACGTGTTATCCCTCACCAATGAACAGTTCGATTGGTTATTACGTGGATTGGATATCGAAAAGCTACAACCGCA
TACTGAAAAATATTTCTTTTCTGTCAGTTAA

Protein sequence : 
MIQWDDVPVYVHRQPVDFRKSINGLSVLVQESMALEVFSRSVFVFGNRTRNKIKILYWDKTGFCLWYKRLEKDKFKWPRR
GDDVLSLTNEQFDWLLRGLDIEKLQPHTEKYFFSVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 2e-21 50
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-09 44
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-09 44
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 9e-09 43
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 6e-08 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 6e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJA_1312 YP_001981803.1 IS66 family element, Orf2 protein VFG1737 Protein 2e-09 43