|
Name : RHECIAT_CH0000981 (RHECIAT_CH0000981) Accession : YP_001977144.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Unknown Product : transcriptional accessory protein (RNA binding S1 domain) Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 991804 - 994113 bp Length : 2310 bp Strand : + Note : ypch00324 DNA sequence : ATGGCCGCAGACCTCCGTTTTCTCGCAGCCCGCATCGCGGCCGAAATCAATGCCCGGCCGGATCAGGCCAAAGCCGCGAT CGAGCTGCTCGACGAGGGCGCCACCGTGCCCTTCATCGCACGCTACCGCAAGGAGGTGACGGGCGGGCTTGACGATACGC AGCTGCGCGATCTCGCCGAGCGGCTGGTCTATCTGCGCGAACTCGAAGCCCGGCGGGCCACGATCGTCGAATCGATCACA AGCCAGGGCAAGATGACCGACGAGCTGATGGCCAAGGTGGCCGGCGCCGGAACCAAGGCCGAGCTCGAGGATCTCTATCT TCCCTATAAGCCGAAGCGGCGCACCCGCGCCGAAATTGCCCGCGAACGCGGCCTCGGCCCGCTTGCCGAGGCGATCCTTG CCGACCGCGGCCGGGAGCCGTCGGTGCTCGCCGAAGGTTTCATCACCGCTGATGTGGCCGATGTGAAGACGGCGCTTGAA GGCGCGCGGGACATCATCGCCGAAGGCATTGCCGAAAATGCCGACCTGCTCGGCAAATTGCGCGCCCATATGCGCCAGGC GTCGCTGCTGAAGGCCAAGGTCGTCGACGGCAAGCAGGCGACGGGCGAGAAGTTTTCCGATTATTTCGATCATTCCGAAC GCTGGGCGACCGCCCCCGGCCACCGCGCGCTCGCGATGCTGCGCGGCTGGAACGAGGAGGTGCTGACGCTGACGATCGAG GCCGATGCCGATACCGCCTCGCCGAACAAGCCGGTCGAACGGATGATCGCCGCGGCTTATGAGATCGGCGCGAGCCGCCC CGGCGACCGCTGGCTGATGGAGGTCGCCAGCTGGACCTGGCGCGTCAAGCTTTCCATGTCGCTGTCGCTCGACCTGATGC GCGAACTGCGCGAGAGAGCCGAAGAGGAGGCGATCCATGTCTTCGCCCGCAATCTCAAGGATCTGCTGCTCGCCGCCCCC GCCGGCTCGCGCGCGACCATGGGCCTCGATCCCGGCATCCGCACCGGCGTCAAGGTCGCCGTCGTCGACGGCACCGGCAA GGTGGTTGCGACCTCGACGGTCTACCCCTTCCAACCGCGAAACGACGTGCGCGGCGCCCAGGTCGAACTCGCATCGCTGA TCCGCAAGCACAATGTCGAGCTGATCTCGATCGGCAACGGCACCGGCAGCCGCGAGACGGAAAAGCTGGTGGCCGACATG CTGGCCGAACTGCCGGCGCCGAAGCCGACCAAGGTCATCGTCTCGGAAGCGGGCGCCTCGGTTTATTCCGCCTCGGCAAC CGCAGCGGCGGAATTTCCCGATCTCGACGTGTCGCTGCGCGGTGCCGTCTCGATCGCCCGGCGTCTGCAGGATCCGCTCG CCGAACTCGTCAAGATCGAGCCGAAGTCGATCGGCGTCGGCCAGTATCAGCACGATGTCGACCAGCAGAAGCTGTCGCGT TCGCTCGATGCCGTCGTCGAAGACGCGGTGAATGCCGTCGGCGTCGATCTCAACACGGCGTCGGCGCCGCTGCTCGCCCG CGTCTCCGGCCTCGGCCCATCGATTGCGGACGCGATCGTGCGCCACCGCGACAGCGAGGGCCGCTTCGAGACGCGCCGCG ATCTGTTGAAGGTCGCCCGGCTCGGCGGCCGCACCTTCGAGCAATGCGCCGGCTTCCTGCGCATCCCGAACGGCAAGGAG CCGCTCGACGCCTCCTCCGTCCACCCGGAGGCCTATGGCGTCGCCAAGAAGATCGTCGCCGCCTGCGGCCGCGATCTGCG CGCGCTGATGGGCGACAGCGCGGTGCTGAAAGCGATCGATCCGCGTCAGTTCATCGACGAGACATTCGGTCTGCCGACGG TGCGTGACATCATCGCCGAGCTGGAAAAGCCCGGCCGCGACCCGCGCCCGAGCTTCAAGACCGCGACCTTCGCCGAGGGC GTCAACGAAATTTCCGACCTGAAGCCCGGTATGGTGCTTGAGGGAACGGTGACCAATGTCGCTGCATTCGGCGCTTTCGT CGATATAGGCGTGCATCAGGACGGGCTGGTGCATGTGTCGCAGCTTGCCGATCGCTTCGTCAAGGATCCGCATGAGGTCG TCAAGGCGGGCGATGTCGTCAAGGTGCGGGTCGTCGAGGTCGACGCCAAGCGCAAGCGCATCGCTCTGTCGATGAAACGA GATGACGGTTCTGCAGCACCGCCGCCGCGTGGTGATTCTCGCGGAAACCAGGGCTCGCGGCCGCAGAACGAAAGACGGCC GGCGGCGCCGAAACAGGAGAGCCAGGGTGCCTTCGGCGCCGCGCTGGCCGAAGCGATGAAGCGAAAATAA Protein sequence : MAADLRFLAARIAAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRDLAERLVYLRELEARRATIVESIT SQGKMTDELMAKVAGAGTKAELEDLYLPYKPKRRTRAEIARERGLGPLAEAILADRGREPSVLAEGFITADVADVKTALE GARDIIAEGIAENADLLGKLRAHMRQASLLKAKVVDGKQATGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIE ADADTASPNKPVERMIAAAYEIGASRPGDRWLMEVASWTWRVKLSMSLSLDLMRELRERAEEEAIHVFARNLKDLLLAAP AGSRATMGLDPGIRTGVKVAVVDGTGKVVATSTVYPFQPRNDVRGAQVELASLIRKHNVELISIGNGTGSRETEKLVADM LAELPAPKPTKVIVSEAGASVYSASATAAAEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQQKLSR SLDAVVEDAVNAVGVDLNTASAPLLARVSGLGPSIADAIVRHRDSEGRFETRRDLLKVARLGGRTFEQCAGFLRIPNGKE PLDASSVHPEAYGVAKKIVAACGRDLRALMGDSAVLKAIDPRQFIDETFGLPTVRDIIAELEKPGRDPRPSFKTATFAEG VNEISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDAKRKRIALSMKR DDGSAAPPPRGDSRGNQGSRPQNERRPAAPKQESQGAFGAALAEAMKRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 58 |
