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Name : fliI (RHECIAT_CH0000733) Accession : YP_001976900.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 728536 - 729930 bp Length : 1395 bp Strand : + Note : involved in type III protein export during flagellum assembly DNA sequence : ATGAGCACGCTACTGGCCGAGGACAGCCTTTCCCCGACGCTGGCGCATCTGGCGGGTCTCGTCGACCAATATGCATCGCC CGACTTCGCGGTGGCCCATGGTGGTCGCGTGCAGACCATTGCCGCCGGCCACTACACCGTTCGCGGTCTTTCCCGCCATG TTCGTCTCGGCGAGTTCGTGGCGCATAAATCCGCCTCCGGCGTCCATCTCGGCGAGGTCGTCCGTGTCGAGCCGGAGCTG ATCTACGTCTGCCCCATCGAACCCGGCGAGCCGATCGGCATCCACGATACCGTCATCCGCAAGGGCGCTTTCCGCATTTC GCCATCCGACAGCTGGTGCGGGCGCACCGTCAATTCGCTCTGCGAGCCGATCGACGGGCAGGGCCCGATCGTCGAGGGCC TCGATCGCCGCTCGATCTCCAACACCGCGCCGCCGTCGATGACCCGACAACGCGTCGGAACAGGCTTCAAGACCGGCGTG CGCGCGATCGACATCTTCTCGCCGCTCTGCCTCGGGCAGCGCCTCGGCATTTTCGCCGGATCCGGTGTCGGCAAGTCGAC GCTTCTGTCGATGCTCGCCCGTGCCGACGCATTCGACAAGGTTGTCATCGCGCTCGTCGGCGAACGCGGCCGCGAGGTGC GCGAGTTCATCGAGGATACGCTCGGCAGCAACATGAAGAAGGCGATCGCCGTCGTCGCGACCAGCGACGAGAGCCCGATG CTGCGCAAGATGGCGCCGCTGACGGCGATCACCATTGCCGAGCATTTCCGCGACAAGGGCGAGAACGTCCTTTTCATCGT CGACAGCGTCACCCGTTTCGCCCATGCGATCCGCGAGGTGGCGACCGCCTCCGGCGAGCCGCCGATCGCGCGCGGTTACC CTGCGTCGGTCTTCACCGAACTGCCGCGCCTGCTCGAGCGCGCCGGTCCCGGCCCTGAGGGCGCCGGCACGATTACCGCG ATCATCTCGATCCTCGTCGACGGCGACAACCACAACGACCCGATTGCCGATTCGACGCGCGGCATCCTCGACGGCCATAT CGTCCTGCAGCGCAGCCTCGCCGAAGAGGGGCGTTATCCGCCGATCGATCCGCTCGCCTCGATCTCGCGTCTTGCCCGCA AGGCCTGGACGCCGGACCAGGAGAAGCTGGTGTCGCGGCTGAAAGTGCTGATCCACCGCTTCGAGGAGACGCGGGACCTG CGCCTGATCGGCGGCTACCGCCAGGGCGCCGATCCCGACCTCGACATGGCGGTCAAGCAGGTCCCCATCATTTACGACGT CCTGAAACAGGCGCCGGGCGATCGTGAGTCGGTCGACGCCTTTGCTGACCTCGCCGGCGCGCTGAAAGCCGCAGCCGGCA TGGGCAATCCGGGCGCACCCATCCAGAGGAGATAG Protein sequence : MSTLLAEDSLSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVHLGEVVRVEPEL IYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGQGPIVEGLDRRSISNTAPPSMTRQRVGTGFKTGV RAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPM LRKMAPLTAITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAGPGPEGAGTITA IISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASISRLARKAWTPDQEKLVSRLKVLIHRFEETRDL RLIGGYRQGADPDLDMAVKQVPIIYDVLKQAPGDRESVDAFADLAGALKAAAGMGNPGAPIQRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-60 | 46 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 8e-61 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 6e-61 | 43 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-62 | 43 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-62 | 43 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-62 | 43 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 8e-61 | 43 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-51 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 8e-51 | 42 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 5e-51 | 42 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-61 | 41 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-61 | 41 |
| escN | YP_003236088.1 | translocator EscN | Virulence | LEE | Protein | 9e-59 | 41 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 1e-58 | 41 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 1e-58 | 41 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 2e-58 | 41 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 1e-58 | 41 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 2e-58 | 41 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 3e-60 | 41 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 5e-57 | 41 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 5e-57 | 41 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 2e-57 | 41 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 2e-57 | 41 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 3e-57 | 41 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 2e-57 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 1e-63 | 46 |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 3e-66 | 44 |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 5e-66 | 42 |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 6e-60 | 41 |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG0812 | Protein | 7e-59 | 41 |
| fliI | YP_001976900.1 | flagellum-specific ATP synthase | VFG0730 | Protein | 7e-59 | 41 |
