Gene Information

Name : RHECIAT_CH0004221 (RHECIAT_CH0004221)
Accession : YP_001980328.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein (involved in lysophospholipase L1 biosynthesis)
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4292642 - 4293349 bp
Length : 708 bp
Strand : +
Note : ypch01481

DNA sequence :
TTGGCAAAAACCATCATCGAGTTGAAGGGCGCCGATCTGACCCTTGGCAGTGCAGCCGCTTCCGTCCATGTGCTGAAGGG
CATCGACCTCGATATATCAGCCGGCGAATCCGTCGGAATCGTCGGCCCTTCCGGTTCCGGCAAGTCGACGCTGCTGATGG
TGCTTGCCGGATTGGAGAAGCTCGACAGCGGCGAAATCAACATCAACGACACGCCGCTCCATGCGCTCAGCGAGGACGAG
GTCGCCGACTTCCGCGGCCGTAACATCGGCATCGTCTTCCAGTCCTTCCACCTGATTGCCAATATGACGGCGCTGGAAAA
CGTCGCCGTGCCGCTGGAGCTCGCCAATGTCCGCAACGCCTTCGAAATCGCCCGCCGCGAGCTGAATTCGGTCGGCCTCG
GCGAACGGTTGAACCACTATCCCGGCCAGCTTTCCGGCGGCGAACAGCAGCGCGTCGCGATCGCTAGGGCGCTCGCCCCC
TCGCCCGCTCTGCTGATCGCCGACGAGCCCACCGGCAATCTCGATACCGAGACCGGCCGCCAGATCGCCGACCTATTGTT
TTCCAAACAGGCCGAACGCGGCATGACCCTGCTGCTCGTCACCCACGACGTCTCGCTTGCGAACCGTTGCTCGCGCCAGA
TCCGCGTCCGCTCCGGCCGGATCGAAGGCGACAGCGCCGCCCGCCGCAGCGAGGCGGCAATCGCATGA

Protein sequence :
MAKTIIELKGADLTLGSAAASVHVLKGIDLDISAGESVGIVGPSGSGKSTLLMVLAGLEKLDSGEININDTPLHALSEDE
VADFRGRNIGIVFQSFHLIANMTALENVAVPLELANVRNAFEIARRELNSVGLGERLNHYPGQLSGGEQQRVAIARALAP
SPALLIADEPTGNLDTETGRQIADLLFSKQAERGMTLLLVTHDVSLANRCSRQIRVRSGRIEGDSAARRSEAAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHECIAT_CH0004221 YP_001980328.1 ABC transporter ATP-binding protein (involved in lysophospholipase L1 biosynthesis) NC_008702.1.4606598. Protein 2e-35 48
RHECIAT_CH0004221 YP_001980328.1 ABC transporter ATP-binding protein (involved in lysophospholipase L1 biosynthesis) NC_012469.1.7686878. Protein 2e-38 44
RHECIAT_CH0004221 YP_001980328.1 ABC transporter ATP-binding protein (involved in lysophospholipase L1 biosynthesis) NC_012469.1.7685735. Protein 4e-34 42
RHECIAT_CH0004221 YP_001980328.1 ABC transporter ATP-binding protein (involved in lysophospholipase L1 biosynthesis) CP001581.1.gene798.p Protein 2e-34 41