Gene Information

Name : RHECIAT_CH0003997 (RHECIAT_CH0003997)
Accession : YP_001980112.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (NAD(+)) protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 4058620 - 4060128 bp
Length : 1509 bp
Strand : +
Note : ypch01412

DNA sequence :
ATGCTTCATCAGAAAATCGTCGAGTCGCCGTTCAAGCTGAAATACGGCAACTATATCGGCGGCGAATGGCGCGACCCGGT
CGAAGGCAAGTATTTCGAAAACCTGACGCCGGTCACCGGCGGCAAGCTCTGCGACATCCCCCGTTCCGATGAAAAGGACA
TCAATCTCGCGCTCGACGCCGCTCACGCCGCCAAGGAAAAATGGGGCCGCACCTCCGCTGCCGAGCGCTCCAATATCCTC
ATGAAGATCGCCCAGCGCATGGAGGACAAGCTGGAATTGCTCGCCCAGGCCGAGACCTGGGACAATGGCAAGCCGATCCG
CGAAACGATGGCGGCCGACATTCCGCTGGCGATCGACCACTTCCGCTATTTCGCCTCCTGCATTCGCGCCCAGGAAGGCT
CGATCGGCGAGATCGATCACGATACGATCGCCTATCACTTCCACGAGCCGCTCGGCGTCGTCGGCCAGATCATTCCCTGG
AACTTCCCGATCCTGATGGCCACGTGGAAACTGGCTCCGGCGCTTGCGGCCGGCAACTGCGTCGTCTTGAAGCCTGCCGA
ACAGACGCCGGCCTCGATCCTGCTCTGGGCCGAACTGGTCGGCGATCTGCTGCCGCCCGGCGTGCTCAACATCGTCAACG
GCTTCGGCATCGAGGCCGGCAAGCCGCTGGCGACCAGCCCGCGCATCGCCAAGATCGCCTTCACCGGCGAGACGACGACA
GGCCGGCTCATCATGCAGTACGCCAGCCAGAACCTCATTCCGGTGACGCTGGAACTCGGCGGCAAATCGCCGAACATCTT
CTTCGCCGACGTGATGGCCGAGGACGACGATTTCCTCGACAAGGCGCTCGAAGGCTTTGCGATGTTTGCCCTCAACCAGG
GCGAAGTCTGCACCTGCCCGAGCCGCGCCCTCGTCCAGGAATCGATCTACGACCGCTTCATGGAAAAGGCCGTCAAGCGC
GTCGAGGCGATCAAGCAGGGCAACCCGCTCGACACGGCGACCATGATCGGCGCACAGGCCTCGACCGAACAGTTGGAAAA
GATCCTCGCCTATCTCGATATCGGCAAGCAGGAAGGCGCCGAGGTGCTGACCGGCGGCTCGCGCAACGATCTCGGCGGCG
ACCTGGCGAACGGCTATTACGTCAAGCCGACGATCTTCAAGGGCCACAACAAGATGCGCATCTTCCAGGAGGAGATCTTC
GGACCGGTGGTCTCGGTCACGACGTTCAAAACCGAAAAGGAAGCGCTTGAAATCGCCAACGACACGCTTTACGGCCTCGG
CGCCGGCGTCTGGAGCCGCGACGCCAATCGCTGCTATCGCTTCGGCCGCGAGATCCAGGCCGGCCGCGTCTGGACCAACT
GCTACCACGCCTACCCCGCCCACGCCGCCTTCGGTGGCTACAAGCAATCGGGCATCGGCCGCGAAACCCACAAGATGATG
CTTGAGCACTACCAGCAGACCAAGAACATGCTGGTGAGCTACAGCCCGAAAGCGCTCGGTTTCTTCTGA

Protein sequence :
MLHQKIVESPFKLKYGNYIGGEWRDPVEGKYFENLTPVTGGKLCDIPRSDEKDINLALDAAHAAKEKWGRTSAAERSNIL
MKIAQRMEDKLELLAQAETWDNGKPIRETMAADIPLAIDHFRYFASCIRAQEGSIGEIDHDTIAYHFHEPLGVVGQIIPW
NFPILMATWKLAPALAAGNCVVLKPAEQTPASILLWAELVGDLLPPGVLNIVNGFGIEAGKPLATSPRIAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDFLDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMEKAVKR
VEAIKQGNPLDTATMIGAQASTEQLEKILAYLDIGKQEGAEVLTGGSRNDLGGDLANGYYVKPTIFKGHNKMRIFQEEIF
GPVVSVTTFKTEKEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LEHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-154 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-159 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHECIAT_CH0003997 YP_001980112.1 aldehyde dehydrogenase (NAD(+)) protein VFG0082 Protein 4e-155 65