Gene Information

Name : nrdF (RHECIAT_CH0003988)
Accession : YP_001980103.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit beta
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0208
EC number : 1.17.4.1
Position : 4048094 - 4049068 bp
Length : 975 bp
Strand : -
Note : B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE

DNA sequence :
ATGAACATATCCATAAAGCCAATCAGCCGCGTGCGCGCCATCAATTGGAACCGCATTGAGGACGATAAGGATCTCGAAGT
CTGGAACCGGTTGACCGGCAATTTCTGGCTGCCGGAGAAGGTGCCGCTGTCCAATGACATTCCCTCCTGGGCGACGCTGA
CGGCGGCCGAGCAGCAGCTGACCATCCGTGTCTTCACCGGGCTGACGCTGCTCGACACGATCCAGAACGGCGTCGGCGCG
ATCAGATTGATGGAAGATGCGATGACGCCGCATGAGGAGGCGGTGCTTTCCAACGTCTCCTTCATGGAGGCCGTGCATGC
GCGCTCCTATTCCTCGATCTTCTCGACGCTGTGCTCGACGCCCGACATCGACGATGCCTATCGCTGGTCGGAGGAGAACG
AGTTCCTGCAGCGGAAATCGGCGCTGATCATGGAGCAGTATGGCTCCGGCGATGCCTTGAAGAAGAAGGTTGCCAGCGTC
TTCCTCGAAAGCTTCCTGTTCTATTCCGGCTTCTATCTGCCGATGTACTGGTCAAGCCGCGCCAAGCTGACCAACACGGC
CGACATGATCCGGCTGATCATCCGCGACGAGGCGGTGCATGGCTATTATATCGGCTACAAATTCCAGCGCGGGCTCGAGC
GGCTTTCCGAGGAGAGACGGCAGCAGATCAAGGATTTCGCCTTCGACCTGCTGCTCGAGCTTTACGACAACGAGGCCAGA
TATACCGAGGCGCTCTATGACGGGCTCGGACTGACCGAGGACGTCAAGAAATTCCTGCATTACAACGCCAACAAGGCGCT
GATGAACCTCGGCTATGAGGCGCTTTTCCCGGCCGAGGCCTGCAAGGTCAATCCGGCGATCCTGTCGGCGCTTTCGCCGA
ATGCCGACGAGAACCATGACTTCTTCTCCGGCTCCGGTTCGTCCTATGTCATCGGCAAGGCTGTGGCGACCGAGGACGAG
GATTGGGATTTCTGA

Protein sequence :
MNISIKPISRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGA
IRLMEDAMTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDIDDAYRWSEENEFLQRKSALIMEQYGSGDALKKKVASV
FLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERRQQIKDFAFDLLLELYDNEAR
YTEALYDGLGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDE
DWDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1479 YP_001800873.1 ribonucleoside-diphosphate reductase subunit beta Not tested Not named Protein 5e-107 68