Gene Information

Name : xylA (RHECIAT_CH0003919)
Accession : YP_001980034.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 3974059 - 3975369 bp
Length : 1311 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCACCGGATTTTTCGGCGATATCCAGAAAATCAAATATGAAGGCCCCGACAGCACCAACCCGTTGGCCTTCCGCCA
TTACCAGCCAGACGAGATCGTTCTCGGCAAGCGCATGGAAGACCATCTGCGTTTTGCGGTGGCCTATTGGCACACCTTCA
CCTGGCCGGGCGGCGACCCCTTCGGCGGCCAGACCTTCCTGCGTCCGTGGTTCGAAGACACGATGAAGGCTGCCAAGCTC
AAAGCCGACGTCGCTTTCGAATTCTTCTCGCTGCTCGGCGCGCCCTATTACTGCTTCCATGACGCCGACGTGCGCCCCGA
GGGCAGGAACTTCGCCGAGAACACCAAAAATCTAAACGAAATCGTCGACTACTTCGCTGAGAAGCAGGCGGCGACCGGCA
CCAAACTGCTCTGGGGTACGGCCAACCTCTTCTCCAACCGGCGTTACATGTCGGGAGCGGCGACCAACCCGGATCCCGAT
GTCTTTGCCTTCGCAGCCGCGACGGTCAAGACCTGCATCGACGCCACGCAGAAGCTCGGCGGCGAGAACTACGTGCTCTG
GGGCGGCCGCGAAGGTTACGAAACGCTGCTCAACACCGATCTCAAGCGCGAGCTCGACCAGCTCGGCCGCTTCCTCAACC
TCGTCGTCGAATACAAGCACAAGATCGGCTTCAAGGGCACGATCCTGATCGAGCCGAAGCCGCAGGAGCCGACCAAGCAC
CAGTACGACTATGACGTCGCGACCGTTTACGGCTTCCTCAAGAAGCACGGCGTTGAAAACGAGGTGAAGGTCAATATCGA
GCAGGGCCATGCGATCCTCGCCGGCCACTCCTTCGAGCACGAGCTGGCGCTCGCCAATGCGCTCGGCATCTTCGGCTCGA
TCGACATGAACCGCAACGACTACCAGTCCGGCTGGGACACCGACCAGTTCCCGAACAATGTTCCGGAGATGGCGCTTGCC
TATTACCACGTTCTGGCAGGCGGCGGCTTCAAGACCGGCGGCACCAACTTCGACGCCAAGCTGCGCCGCCAGTCGCTCGA
TCCGGCAGACCTGCTGATCGGCCATATCGGCGGCATGGATTGCTGCGCGCGCGGCCTCAAGGCGGCGGCCAAGATGATCG
AAGACAAGGCTCTGTCGCAGCCGCTTGCCGATCGTTACGCCGGCTGGGAATCGGCCGAGGCGCAGAAGCTCTTCCGCGGT
GAGTATTCGCTGGATGAGATCACCAACTGGGTCGAGAGCCACGACGTCAACCCGCAGCCGAAATCGGGCAAGCAGGAACT
GCTTGAAAACGTCGTCAACCGTTACGTCTGA

Protein sequence :
MSTGFFGDIQKIKYEGPDSTNPLAFRHYQPDEIVLGKRMEDHLRFAVAYWHTFTWPGGDPFGGQTFLRPWFEDTMKAAKL
KADVAFEFFSLLGAPYYCFHDADVRPEGRNFAENTKNLNEIVDYFAEKQAATGTKLLWGTANLFSNRRYMSGAATNPDPD
VFAFAAATVKTCIDATQKLGGENYVLWGGREGYETLLNTDLKRELDQLGRFLNLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKKHGVENEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYHVLAGGGFKTGGTNFDAKLRRQSLDPADLLIGHIGGMDCCARGLKAAAKMIEDKALSQPLADRYAGWESAEAQKLFRG
EYSLDEITNWVESHDVNPQPKSGKQELLENVVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-100 50
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-100 50