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Name : lpsL (RHECIAT_CH0003491) Accession : YP_001979616.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Virulence Product : UDP-glucuronic acid epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.12 Position : 3518900 - 3519916 bp Length : 1017 bp Strand : + Note : - DNA sequence : ATGCGCTACTTCATTACAGGGACGGCCGGTTTCATCGGTTTTCATCTGGCCAGGCGCCTGCTGCAGGAGGGGCATGAGGT AACGGGCTTCGACGGCCTCACGCCCTATTACAACGTCAAGCTCAAGGAGATGCGCCATGCGGCCCTCTCCCAGTTTCCGG CCTTCAAACCGGTCATCGCCATGCTCGAGGACCGGCCGGCGCTGGAGGCGGCTGTCCTTACGGCCACGCCCGACATCCTG ATCCACCTTGCCGCCCAGGCCGGCGTCCGCTACAGCCTGGAAAATCCCGAAGCCTATATCCACTCGAACGTCGAAGGCTC GTGGAACATCATGGAAATCGCCCGGCGGGTCGAAGTCCGTCATCTTATGCTGGCCTCGACATCATCGATCTATGGCGCCA ACGCGACCGTCCCCTTCCGCGAGACCGATCGCGCCGACGAGCCGCTGACCATTTACGCAGCGACGAAGAAATCGATGGAA CTGATGGCGCACAGCTATGCCCATCTCCACAAGATTCCGACCACGGCCTTCCGCTTCTTCACCGTGTACGGCCCATGGGG CCGTCCCGATATGGCGCTGTTCAAATTCGCCAAGAACATGCTCGAGGGCCAGCCGATCGAAATCTACGGCGAAGGCAATA TGAGCCGCGATTTCACCTATATCGATGACCTCGTCGAAGCGATCGTCAGATTGTCGGCAATTGCGCCCAGCGAGGAAAAT CGCCTCGACGACGCGGCGGTCGAAACGCTTTCGCGCCAGGCGCCCTTCCGCGTCGTCAATATCGGCGGTGGCCAGCCGGT CAGTCTGATGGATTTCGTCGAGACGGTGGAAAAGACACTCGGGCGGCCTGCAATTCGGCTGATGCTGGCGATGCAGAAGG GCGACGTGCCGCGCACGTTCGCAGCCCCCGACCTGCTCATCGCGCTAACCGGATACAAGCCGGATACGACCTTGGACGTC GGTGTCAAAGCGTTCGTCGACTGGTATCTCGACGCGCGCGGCGAACTGGACGGCTGA Protein sequence : MRYFITGTAGFIGFHLARRLLQEGHEVTGFDGLTPYYNVKLKEMRHAALSQFPAFKPVIAMLEDRPALEAAVLTATPDIL IHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSME LMAHSYAHLHKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLVEAIVRLSAIAPSEEN RLDDAAVETLSRQAPFRVVNIGGGQPVSLMDFVETVEKTLGRPAIRLMLAMQKGDVPRTFAAPDLLIALTGYKPDTTLDV GVKAFVDWYLDARGELDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-81 | 51 |
