Gene Information

Name : RHECIAT_CH0002817 (RHECIAT_CH0002817)
Accession : YP_001978946.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 2812189 - 2813007 bp
Length : 819 bp
Strand : -
Note : ypch00968

DNA sequence : 
ATGCCCTTGTCCTGTTCCGACCTCTCGGTGATGTACGGCCAGCGAAAGGCGCTCAGCGCCTTCAGCCTTTCGCTCGAAAA
GGGCGAGATCCGGGCGCTGATCGGCCCGAACGGCTCGGGCAAGAGCACGGCGCTGCATGCGCTGGCCGGGCTGATCCGGC
CGGCCGGGGGCCGGGCGTCACTCGGCGGCGTTGCTGTCGCCTCCATGTCGCGCCGCATGCTGGCGAAGAGGCTTGCCTTC
CTGCCGCAGCAGCCGACCGCGCCCGACGAAATGACCGTCGCCCAGCTCGTGCGTCAGGGCCGCTATCCGCATGTCGGCCT
GTTCCGCTCCTATGACAGACGTGACGAAGACGCGATCGGATGGGCGCTCGAAAGCACCGGCCTGTCCGGGCTCGCCGACC
GCAGCCTTCGGGAATTGTCCGGCGGCGAGCGGCAAAGGGCCTGGATATCGGCCGCTCTCGCCCAGGAAGCGGAGATCCTG
CTGCTCGACGAGCCGACCTCCTTCCTCGATATTGGCTACCAGGTGGAGGTGCTCGATCTCGTGCATCGGCTGAGCCGGGA
AAAGGGCGTGACCGTCGTGATGGCGATCCACGACATCAACCAGGCTGTCGCCATCAGCGACCGCATCTCGCTGCTCGAAA
AAGGCGAGCTCCGATTCGACGGCGCCCCGCGCGAGCTTGCCGAACGCGGGCTGATCCAGGAAATCTTCCGCGTCAGAGGC
CGTTTCGTCCAGGTTGCGCCCGACAGTCCGCCGCATTTCGATGTCGAGCTGATGCGGCTTCAGCGGCCCGACACCTGGTC
TAGCGCTTCACCAGCCTGA

Protein sequence : 
MPLSCSDLSVMYGQRKALSAFSLSLEKGEIRALIGPNGSGKSTALHALAGLIRPAGGRASLGGVAVASMSRRMLAKRLAF
LPQQPTAPDEMTVAQLVRQGRYPHVGLFRSYDRRDEDAIGWALESTGLSGLADRSLRELSGGERQRAWISAALAQEAEIL
LLDEPTSFLDIGYQVEVLDLVHRLSREKGVTVVMAIHDINQAVAISDRISLLEKGELRFDGAPRELAERGLIQEIFRVRG
RFVQVAPDSPPHFDVELMRLQRPDTWSSASPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-35 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 7e-22 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-22 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-22 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 5e-22 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-33 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-33 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-33 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-33 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHECIAT_CH0002817 YP_001978946.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 8e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHECIAT_CH0002817 YP_001978946.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 8e-34 41
RHECIAT_CH0002817 YP_001978946.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 1e-37 41