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Name : deoA (RHECIAT_CH0000239) Accession : YP_001976412.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 255535 - 256842 bp Length : 1308 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGATCCCGCAGGAGATCATCCGGCGCAAGCGCGACGGCGGTGAACTCGCCGCCGCCGATATCCGGTCTTTCATCGATGC GCTTGCCGCTGGTCGATTGTCCGAAGGCCAGATCGGCGCCTTCGCCATGGCCGTCTGGTTCAAGGGCATGTCGCGCCAGG AAATCGTCGCCTTGACGCTGGCGATGGCCGATTCCGGCGACCGGCTGCAATGGGCCGATATCGACCGTCCGATTGCCGAC AAACATTCGACTGGAGGCGTCGGCGACAATGTCTCGCTGATGCTGGCGCCGATCGCCGCCGCCTGCGGCCTCGCCGTCCC GATGATATCAGGCCGCGGCCTCGGCCATACCGGCGGCACGCTCGATAAGCTTGAATCCATTCCCGGCTATATGATCACCC CGGATGCGGATCTGTTTCACCGGGTGGTCAAGCAGGCAGGATGCGCCATCATCGGCCAGACCGGCGCTTTGGCGCCCGCT GACGGCAGGCTCTACGCCGTGCGCGATGTAACCGCCACCGTCGATTCCATTCCCTTGATCACCGCCTCCATCCTCTCCAA GAAGCTTGCCGCCGGTCTTCAGACGCTGGTGCTCGACGTCAAGGTCGGCAACGGCGCCTTCATGGCTGAGCGCGATCAGG CGGAAATGCTGGCACGGTCGCTGGTCGAGGTGGCGAATGGCGCGGGCGTGAAGACGTCGGCGCTCATCACCGACATGAAC GAGCCGCTCGCCGATAGCGCCGGCAACGTCGTGGAGATGCGCAACTGCCTGGATTTCCTGGCGGGCAGGAAAGGAAATAC GCGGCTCGAGGCTGTCGTTCTTGCCTTCGCCGCCGAGATGCTGGAGAAATCGGGCATTGCCGCTTTGCCTGAGGAAGGCG AGGCAATGGCGCGCCGGGCCCTGTCGTCGGGGAAGGCGGCCGAGATTTTCTCGCGCATGGTATCCATGCTCGGCGGCCCG GCCGATCTGATCGAGAACCCGGACAGATACCTCGCTAGAGCGCCGGTCGAAAAGCCTGTTGCGGCCGCGCGGTCCGGCTG GCTTGCCGCCTGCGACGCCCGTGGCATCGGTGTCAGCGTCATCGATCTTGGCGGCGGACGGCGCCATCCCGCCGATCGGA TCGATCACCGCGTCGGCTTCTCCGAACTGCTGCCGCTTGGCACCCGCGTGAATGCCGGCGAGCCGATCGCCCTCGTTCAC GCCGCCGACGACGCCGCGGCGGAAAGGGCGGCCGCAGCACTTGCCGCGCACTACCGCATCACCGAGGACGCGCCGGCGCT GAACCCGATCATTTCAGGCCTTATCTGA Protein sequence : MIPQEIIRRKRDGGELAAADIRSFIDALAAGRLSEGQIGAFAMAVWFKGMSRQEIVALTLAMADSGDRLQWADIDRPIAD KHSTGGVGDNVSLMLAPIAAACGLAVPMISGRGLGHTGGTLDKLESIPGYMITPDADLFHRVVKQAGCAIIGQTGALAPA DGRLYAVRDVTATVDSIPLITASILSKKLAAGLQTLVLDVKVGNGAFMAERDQAEMLARSLVEVANGAGVKTSALITDMN EPLADSAGNVVEMRNCLDFLAGRKGNTRLEAVVLAFAAEMLEKSGIAALPEEGEAMARRALSSGKAAEIFSRMVSMLGGP ADLIENPDRYLARAPVEKPVAAARSGWLAACDARGIGVSVIDLGGGRRHPADRIDHRVGFSELLPLGTRVNAGEPIALVH AADDAAAERAAAALAAHYRITEDAPALNPIISGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 5e-67 | 44 |
