Gene Information

Name : RHECIAT_CH0000222 (RHECIAT_CH0000222)
Accession : YP_001976396.1
Strain : Rhizobium etli CIAT 652
Genome accession: NC_010994
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 241359 - 242987 bp
Length : 1629 bp
Strand : +
Note : ypch00083

DNA sequence :
ATGACAGAACCGCTCCTTTCCGTCCGTAATCTCTCGGTTGCCTTTCATCAGGGCGGCGAGGCGTCGCTTGCCGTCGATCG
GGTCTCCTTCGATATCGCCAAGGGCGAGGTGGTCGCGCTTGTCGGCGAATCCGGTTCCGGCAAGTCGGTCTCGGCCAATT
CGATCCTGAAGCTTCTGCCCTATCCCACCGCAAGCCATCCCTCCGGCGAGATCCTGTTCAAGGGCAAGGATCTGCTGAAG
GCCTCGGAACGGGCGTTGCGCGAGGTGCGCGGCAACGACATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCAATCC
GCTTCATTCGATCGAGAAGCAGATCGCCGAAATCCTCGCTTTGCACCAGGGCATCACCGGCCAGGCGGCGCGCCAGCGCG
TTCTGGAATTGTTGAACCAGGTCGGCATTCGCGAGCCGGAAAAACGGCTGAAGGCCTATCCGCACGAACTGTCAGGCGGC
CAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGGCCGGAATTGCTGATCGCCGATGAGCCGACCACGGCGCT
CGACGTCACCGTGCAGGCGCAGATCCTGGAGCTGCTGCGACAATTGAAGGCGGCGCACGGCATGTCGATGCTGTTCATCA
CCCATGATCTCGGCATCGTGCGCAAGTTCGCCGACCGCGTCTGCGTGATGACCAAGGGCAGGATCGTCGAGACAGGAACG
GTCGCGGAGGTCTTCGCCAATCCGAAGCACGATTATACCCGCCACCTCCTTGCCTCCGAGCCGCGGGGCGAGCCTCCGCG
TGCCGATCCGACGAAGCCGGTGGTGATGGAAGGTTCCGATATCCGTGTCTGGTTTCCGATCAAGGCGGGGCTGATGCGCC
GTGTCGTCGACCACGTCAAGGCGGTCGACGGCATCGATCTCTCGCTGCGCGCCGGGCAGACGCTCGGGGTGGTCGGCGAG
TCCGGCTCCGGCAAGACCACTCTCGGCCTGGCGCTCACCCGGCTGATCTCCTCGCAAGGGCGCATCGCTTTCGTCGGCAA
GGACATAGCCGGCTATTCGTTCAGCGAGATGCGGCCGCTGCGCAACCAGTTGCAGATTGTCTTCCAGGACCCTTATGGCT
CGCTCAGTCCGCGCATGTCGGTCGGCGATATCATTGCCGAAGGGCTGAAGGTGCATGAACGCGCCTTGAGCGCCGAGGAG
CGAGACCAGCGCGTCTGCTGGGCGCTGGAGGAGGTCGGTCTCGACCCGCTGACCCGCTGGCGTTACCCGCACGAATTTTC
CGGCGGCCAGCGCCAGCGCATCGCCATTGCCCGCGCCATGGTGCTCAAACCGCGCTTCGTCATGCTCGACGAGCCGACCT
CGGCGCTCGATATGAGCGTCCAGGCCCAGGTCGTCGATCTCCTGCGTGACCTGCAGAAGAAGCACGATCTCGCCTATCTC
TTCATCAGCCATGATCTGAAGGTGGTGAAGGCGCTTGCCAACGACGTCATCGTCATGCGTTTCGGCAAGGTGGTGGAGCA
GGGGCCGTCAGCGGAAATCTTCCGTGCTCCGAAAGACGATTACACCAAGGCGCTGATGGCCGCCGCCTTCAACATCGAGG
CGGTGCCGACGCCCGCCGTGCAGCAGTAA

Protein sequence :
MTEPLLSVRNLSVAFHQGGEASLAVDRVSFDIAKGEVVALVGESGSGKSVSANSILKLLPYPTASHPSGEILFKGKDLLK
ASERALREVRGNDITMIFQEPMTSLNPLHSIEKQIAEILALHQGITGQAARQRVLELLNQVGIREPEKRLKAYPHELSGG
QRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLRQLKAAHGMSMLFITHDLGIVRKFADRVCVMTKGRIVETGT
VAEVFANPKHDYTRHLLASEPRGEPPRADPTKPVVMEGSDIRVWFPIKAGLMRRVVDHVKAVDGIDLSLRAGQTLGVVGE
SGSGKTTLGLALTRLISSQGRIAFVGKDIAGYSFSEMRPLRNQLQIVFQDPYGSLSPRMSVGDIIAEGLKVHERALSAEE
RDQRVCWALEEVGLDPLTRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDLAYL
FISHDLKVVKALANDVIVMRFGKVVEQGPSAEIFRAPKDDYTKALMAAAFNIEAVPTPAVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-101 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-85 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-85 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-85 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-85 43