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Name : tetA (RHECIAT_CH0001123) Accession : YP_001977284.1 Strain : Rhizobium etli CIAT 652 Genome accession: NC_010994 Putative virulence/resistance : Resistance Product : tetracycline efflux transporter protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 1132255 - 1133448 bp Length : 1194 bp Strand : - Note : - DNA sequence : ATGACCAGATCTCTTATCGTCATTTTCACCGCTATTGTTCTCGATGCCGTCGGCATCGGGCTGATTTTCCCGATCCTGCC GTCGCTGCTTGAAGACATCACCCATGCGGCAAACGTCGCGCCCTTTATCGGCGCGATGACGGCGCTCTACGCGCTGATGC AGTTCATCTTCGCCCCCGTGCTCGGAGCGCTGAGCGATCGGCTCGGCCGCCGGCCGGTGCTGCTGATTTCGCTAGCCGGT GCGGCCGTCAACTACCTGTTCCTCGCCTTGGCGCCCAATCTGACCCTGCTGTTCATCGGCCGGGCGATTGCCGGGCTGAC CAGCGCCAATATCTCGGTCGCCACCGCCTATATCACCGACATTTCGCCGGAGGAGAAACGCGCCCGCCGCTTCGGGCTGT TCAACGCCATGTTCGGCCTCGGCTTCATCATCGGCCCAGTTCTCGGCGGCGTGCTCGGCGATCATTGGCTGCGGCTGCCC TTCCTCGCCGCGGCGGTGCTGAATGGCGCCAACCTGCTGCTCGCCATCTTCGTCCTGCCGGAATCGCGTCCCGGCCGCCG CGAGACGATCGACCTGGCGGCGCTCAATCCGCTGAAGCCGCTGCGCTCGGTGCTGGAGGTCAAGAGCCTGCTGCCCATCG TCATCCTGTTCTTCATCTTCAGCGCCACCGGCGAGGCTTACGGCACCTGCTGGGCGCTCTGGGGCGCCGACGCCTTCCAA TGGAACGGACTGTCGATCGGCCTTTCGCTCGGCGCCTTCGGCATCTGCCAGACGTTTGCCCAGGCCTTGCTGCCGGGGCC GGCCGTGAAACTGCTCGGCGAACGCGCCGCGATCCTTGTGGGTGTTGCCGGCGTCTCACTCGCGCTCACCGTCATGGCCT TTGCCGGCCAGGGCTGGATGATCTTCGCGATCATGCCGGTCTTCACCCTCGGCGGCATCGGCGTGCCGGCGCTGCAGTCG CTCGCAACCCGGCAGGTCGACGAGAACAGCCAGGGCCAGTTCCAGGGCGTGCTGGCGTCGGCCGTCAGCCTCGCCTCGAT CGCAGCACCACTCGGCTTTTCCAGCCTCTATTTCCTCGTCCGAGCGGAATGGCCGGGCGCCATCTGGCTGTCGGTCGTCG CGGTCTACGCGCTCACCGTGCCGCTGGTGCTCGGGTTGCGGCTGAAGATGCCGGAGCGGGCGGCGGTGAGTTAG Protein sequence : MTRSLIVIFTAIVLDAVGIGLIFPILPSLLEDITHAANVAPFIGAMTALYALMQFIFAPVLGALSDRLGRRPVLLISLAG AAVNYLFLALAPNLTLLFIGRAIAGLTSANISVATAYITDISPEEKRARRFGLFNAMFGLGFIIGPVLGGVLGDHWLRLP FLAAAVLNGANLLLAIFVLPESRPGRRETIDLAALNPLKPLRSVLEVKSLLPIVILFFIFSATGEAYGTCWALWGADAFQ WNGLSIGLSLGAFGICQTFAQALLPGPAVKLLGERAAILVGVAGVSLALTVMAFAGQGWMIFAIMPVFTLGGIGVPALQS LATRQVDENSQGQFQGVLASAVSLASIAAPLGFSSLYFLVRAEWPGAIWLSVVAVYALTVPLVLGLRLKMPERAAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 5e-67 | 49 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 5e-67 | 49 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 6e-67 | 49 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 5e-67 | 49 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 5e-67 | 49 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-67 | 49 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 8e-56 | 44 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 7e-54 | 44 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 7e-54 | 44 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 7e-54 | 44 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 7e-54 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_011586.7043399.p0 | Protein | 4e-97 | 61 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_011595.7059241.p0 | Protein | 1e-97 | 61 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_010410.6003291.p0 | Protein | 1e-97 | 61 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_009085.4918440.p0 | Protein | 2e-91 | 60 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AF090987.gene.p01 | Protein | 2e-70 | 50 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | Y19114.gene.p01 | Protein | 1e-67 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AY264780.2.gene3.p01 | Protein | 2e-72 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | X75761.gene.p01 | Protein | 8e-66 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | CP001485.1.gene2821. | Protein | 2e-67 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AF534183.gene.p01 | Protein | 2e-67 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_010410.6002597.p0 | Protein | 2e-67 | 49 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_011586.7045189.p0 | Protein | 1e-60 | 48 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AY743590.gene.p01 | Protein | 2e-69 | 47 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AF133139.gene.p01 | Protein | 9e-55 | 44 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | NC_010410.6002612.p0 | Protein | 5e-56 | 44 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AF133140.gene.p01 | Protein | 5e-56 | 44 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AJ420072.gene.p01 | Protein | 4e-54 | 42 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | AF121000.gene.p01 | Protein | 9e-53 | 41 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | Y19116.gene.p01 | Protein | 2e-49 | 41 |
| tetA | YP_001977284.1 | tetracycline efflux transporter protein | L06940.gene.p01 | Protein | 5e-51 | 41 |
