Gene Information

Name : Smlt0594 (Smlt0594)
Accession : YP_001970495.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Virulence
Product : two-component response regulator transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 603991 - 604710 bp
Length : 720 bp
Strand : +
Note : similarity:fasta; CAS0620; bcenocepacia; putative response regulator; length 239 aa; id=72.3%; E()=3.1e-62; 231 aa overlap; query 4-234 aa; subject 5-234 aa; similarity:fasta; SCO3741; scoelicolor; putative response regulator; length 256 aa; id=49.4%; E()

DNA sequence :
ATGTCCACCAAACGCGTGCTGATCGTTGAAGACGATGCCCACATCGCCGACCTGCTGCGCATGCATCTGGGCGATGAGGG
CTACGACGTCGCCCATGCCGCCAGCGGCGATGCCGGCCTGCGCCTGCTCGAGCAGGAAGGGCCATGGGATGCGCTGGTGC
TGGACGTGATGCTGCCCGGCGTGGACGGCTTGCAGGTGTGCCAGCGTGCACGCGCGATGGCGCGCTATGTGCCGATCATC
ATCATCAGCGCGCGAGGCAGCGAAACGCAGCGCATCGTCGGCCTGGAACTGGGGGCGGATGATTACCTGGCCAAGCCCTT
CTCGATGCCGGAACTGGTGGCACGGGTGCGCGCACTGCTGCGCCGGGCCGAGGCGATGGCGCAGAGCGCGCGCATCGATG
CCGGCGCGATCGAGCTGGGCGGCCTGCAGCTGGACCCGGTCGCGCGTACCGCCTCAGTGGATGGCAACGCACTGGAGCTG
ACCCCGCGCGAGTTCGACCTGCTGCTGTTCTTCGCCCGTCATCCGGACCAGGTGTTCGCGCGCATGGAACTGCTCAACCA
GGTCTGGGGCTACCAGCACGATGGCTACGAGCACACGGTCAACACCCACATCAATCGCCTGCGCAGCAAGATCGAGCCGG
ACCCGGCCAATCCACGGCGGTTGCTGACGGTGTGGGGCCGTGGCTACAAGCTGGTCGATCCTGCCGGGGCGGCGGCATGA

Protein sequence :
MSTKRVLIVEDDAHIADLLRMHLGDEGYDVAHAASGDAGLRLLEQEGPWDALVLDVMLPGVDGLQVCQRARAMARYVPII
IISARGSETQRIVGLELGADDYLAKPFSMPELVARVRALLRRAEAMAQSARIDAGAIELGGLQLDPVARTASVDGNALEL
TPREFDLLLFFARHPDQVFARMELLNQVWGYQHDGYEHTVNTHINRLRSKIEPDPANPRRLLTVWGRGYKLVDPAGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-62 58
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-62 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_012469.1.7685629. Protein 5e-37 45
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_002952.2859905.p0 Protein 2e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_002745.1124361.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_009782.5559369.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_002951.3237708.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_007622.3794472.p0 Protein 2e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_002758.1121668.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_009641.5332272.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_013450.8614421.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_007793.3914279.p0 Protein 3e-38 43
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_012469.1.7686381. Protein 2e-37 42
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator NC_003923.1003749.p0 Protein 4e-38 42
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator AF155139.2.orf0.gene Protein 2e-36 41
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator HE999704.1.gene1528. Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator VFG1563 Protein 8e-63 58
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator VFG1702 Protein 8e-63 58
Smlt0594 YP_001970495.1 two-component response regulator transcriptional regulator VFG1389 Protein 4e-28 45