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Name : Smlt0056 (Smlt0056) Accession : YP_001969986.1 Strain : Stenotrophomonas maltophilia K279a Genome accession: NC_010943 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 60466 - 61656 bp Length : 1191 bp Strand : + Note : similarity:fasta; with=UniProt:Q93UI5; Escherichia coli.; Integrase-like gene 1.; length=401; id 38.579%; ungapped id 40.000%; E()=7.8e-46; 394 aa overlap; query 1-389; subject 1-385; similarity:fasta; with=UniProt:Q8XY92; Ralstonia solanacearum (Pseudomo DNA sequence : ATGCCTCTGACCGATACCGCTATTCGCAAGACCAAGCCTTCCGCCAGCGTCCAGAAGCTCCGTGATGGTGGTGGCCTGTA CCTGCTCTTGCGCCCTGATGGTGCCAAGTGGTGGCGCTGGGATTACCGCCGGCCAGTGACTGGCAAGCGCAATACGCTGT CGCTGGGTACCTATCCCGATGTAAGCCTGGCCGTCGCTCGAGAGCGCCACGTCGCAGCACGCAAGCTACTAGCCGGTGGC ATCGATCCTGGCGAGCATCGCAAGGCACAGAAGAAGGCAGTCGTTGAGAGTAGTGCCAGCACGTTTGAGGCTGTTGCAGC GGAGTACTTTTCCATGCGAGCTGGGAAGCTCTCTGCTGAATCAATCAGCCATGAGCGACGCATCGTTGAAAGAGACTTGA ATCCGTACCTTGGCAGATCTCCTGTAGGTGCAATACCTGCACGGGAGCTGCTGGATGCACTGCGAAGGATCGAATCGCGC GGTGCTGTCAAAACCGCACACCGTGCTCGGGGGATAGCTGGAAGGGTGTTCCGCTACGCCATAGCTACTGGCCGTGCGGA TCGCAATCCGGCAGATGATCTAAGAGGGGCGCTTGCTTCTTCGGAAGTGCAGCACTTCCCCAGCATTACCGACCCATCCC TGATCACCGGTCTGCTGCGTGCAACGCATGGCTATCAGGGCTCGCCTGTGGTCCAGGCTGCACTACGGTTGGCCCCTTTG GTGTTTGTACGTCCTGGCGAACTACGCCATGCCCTGTGGGACGACATTGATCTTGATGCAGGTCAGTGGCGCTTCACCGC AACCAAGACTGGCCAGCCGCACATCGTTCCTCTGGCAGTGCAGGCCGTTGCCATTCTGCGGGAGCTGCACCCGTTGACCT GTCGAGCTAAGTACGTTTTCCCTTGCATGATCGGCAAGGGAAGACCCATGAGTGAGAACGCAGTCAATGGCGCACTGCGT CGGCTGGGCTATGAATCTGGCTCCATGACCGGCCATGGCTTCCGCGCGATGGCGCGCACTGTCTTGGATGAGGTGCTGGG TTTCCGACCAGACTACATCGAGCACCAGCTTGCACATGCCGTGCGTGATCCAAACGGACGGGCATACAACCGTACGGCTC ACCTGGTCGAGCGCGCAAAAATGATGCAGGCATGGGCGGACTATCTGGACGGCCTGAGGACCTCCCCCTGA Protein sequence : MPLTDTAIRKTKPSASVQKLRDGGGLYLLLRPDGAKWWRWDYRRPVTGKRNTLSLGTYPDVSLAVARERHVAARKLLAGG IDPGEHRKAQKKAVVESSASTFEAVAAEYFSMRAGKLSAESISHERRIVERDLNPYLGRSPVGAIPARELLDALRRIESR GAVKTAHRARGIAGRVFRYAIATGRADRNPADDLRGALASSEVQHFPSITDPSLITGLLRATHGYQGSPVVQAALRLAPL VFVRPGELRHALWDDIDLDAGQWRFTATKTGQPHIVPLAVQAVAILRELHPLTCRAKYVFPCMIGKGRPMSENAVNGALR RLGYESGSMTGHGFRAMARTVLDEVLGFRPDYIEHQLAHAVRDPNGRAYNRTAHLVERAKMMQAWADYLDGLRTSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 8e-57 | 44 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 8e-57 | 44 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 6e-57 | 44 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 6e-57 | 44 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 8e-58 | 43 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-57 | 43 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-57 | 43 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 8e-56 | 42 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 6e-56 | 42 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 8e-56 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smlt0056 | YP_001969986.1 | integrase | VFG0783 | Protein | 3e-57 | 44 |
| Smlt0056 | YP_001969986.1 | integrase | VFG0598 | Protein | 3e-56 | 42 |
