Gene Information

Name : radC (Smlt0399)
Accession : YP_001970313.1
Strain : Stenotrophomonas maltophilia K279a
Genome accession: NC_010943
Putative virulence/resistance : Unknown
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 393898 - 394602 bp
Length : 705 bp
Strand : -
Note : Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase

DNA sequence :
ATGCCCATCCATGACTGGCCCGAACAGGAACGCCCCCGCGAGAAGCTGATCGCGCGCGGGCCCACGGCACTTTCCGACGC
CGAACTGCTGGCCCTGTTTCTCGGCTCCGGGTTCGGTGGCCGCGATGCCGTGCAGACCGCGCGCGACCTGCTGCAGGCGC
ACGGCCCGTTGCGGGTACTGCTCGACCGCCCCGCCGCCGAGCTCGCCCGCCTGCCCGGGCTCGGCCCGGCACGCAGTTGC
ACGCTTGCTGCCGGGCTGGAACTGGCCCATCGCTACCTGGCGGCCGAGCTGGAGCACGGCGAGGCGGTTGGCAACAATCC
GGCGGCGGTCGGCCGCTACCTGCAGCACCGGCTGCGTGGCCAGGCCCGCGAGGTCTTCATGGCCCTGTTCCTGGACAACC
GCCACCGCCTGATCGCCTGTGAAGAGCTGTTCCACGGCACCATCAACGCCGCACCGGTCTACCCCCGCGAAGTGGTGCGG
CGCGCCCTGCTGCACAACGCGGCGGCGGTGATCCTCAGCCACAACCACCCTTCCGGCGACCCGGAACCCTCCAGCGCCGA
TACCCGCATCACCGACGAACTGCAGCAGGCGCTGGCGATGGTGGACGTGCGCCTGCTGGACCACTTCGTGGTCGGCGAGG
GCCGTCCCGTTTCATTTGCTGAACGGGGCCTGCTGTCCCCGCCCCAGCCGCGGCTGTTCGGCTGA

Protein sequence :
MPIHDWPEQERPREKLIARGPTALSDAELLALFLGSGFGGRDAVQTARDLLQAHGPLRVLLDRPAAELARLPGLGPARSC
TLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFMALFLDNRHRLIACEELFHGTINAAPVYPREVVR
RALLHNAAAVILSHNHPSGDPEPSSADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLLSPPQPRLFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 3e-24 45
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 2e-24 45